FastQCFastQC Report
Tue 26 Sept 2023
SRR6826876_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6826876_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30046757
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length45
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTTGGCACCCGAGAATTCCAGGTAGCTAGATCGGAAGAGCGTCG390790.13006062517828462Illumina Small RNA Adapter 2 (100% over 21bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)