FastQCFastQC Report
Tue 26 Sept 2023
SRR6826892_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6826892_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24937303
Total Bases2 Gbp
Sequences flagged as poor quality0
Sequence length36-82
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTACTCTGGAATTCTCGGGTGCCAAGGAGATCGGAAGAGCGGTTCAGCA577750.23168102821704498Illumina Paired End PCR Primer 2 (100% over 22bp)
TCTACTCAGTTTAATCGCTGAAATCACCTCACTGAGGTGTTTCCGATTAA387810.15551401047659405No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)