FastQCFastQC Report
Sat 30 Sept 2023
SRR6876911.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6876911.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30134686
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC2212670.7342601811082418TruSeq Adapter, Index 9 (100% over 50bp)
CCCATTTTTAGTTATAATGATGCCTTATGTGATAGATGCCTCTTTAAAAT332810.11044083883933618No Hit
GCCTTATGTGATAGATGCCTCTTTAAAATATCTAAGTGCTGGGGTTATGA303840.10082733233059073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)