FastQCFastQC Report
Tue 4 Jul 2023
SRR6876916_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6876916_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13393
Total Bases682.4 kbp
Sequences flagged as poor quality0
Sequence length40-51
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGCGCGCCGCTGGTGTAGTGGTATCATGCAAGATTGGCCTGGAATTCTC230.17173150153065034No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)