FastQCFastQC Report
Fri 7 Jul 2023
SRR6893923.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6893923.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22927615
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCGGCCGAGGTGGGATCCCGAGGCTGCGGACTGAAGATCGGAAGAGC525990.22941330792583528No Hit
GCCGGAGGGCGCACCACCGGCCCGTCTCGACTGTACTGAAGATCGGAAGA516960.2254748258813662No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGTGGACTGAAGATCGGAAGAGC446700.19483055695064663No Hit
GGCCGAGGGCGCACCACCGGCCCGTCTCGGATGTACTGAAGATCGGAAGA443390.1933868830229398No Hit
GGCCGAGGGCGCACCACCGGCCCGTCTCGACTGTACTGAAGATCGGAAGA432150.18848449784244894No Hit
GGTGGAGGGCGCACCACCGGCCCGTCTCGACTGTACTGAAGATCGGAAGA391640.1708158480504841No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGTGGGACTGAAGATCGGAAGAGC367060.16009515163264912No Hit
CGGTGAGGGCGCACCACCGGCCCGTCTCGACTGTACTGAAGATCGGAAGA303380.13232078434673647No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGTAGACTGAAGATCGGAAGAGC288630.12588749418550513No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGTGGAACTGAAGATCGGAAGAGC280630.12239825206415932No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGTTGACTGAAGATCGGAAGAGC269280.11744788980449995No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGGGGACTGAAGATCGGAAGAGC263190.11479170423962545No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGACTACTGAAGATCGGAAGAGC259910.11336111496987365No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGTAGTACTGAAGATCGGAAGAGC245670.10715026399387813No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCTGCTGACTGAAGATCGGAAGAGC234050.10208213981262335No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)