FastQCFastQC Report
Fri 7 Jul 2023
SRR6916501.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6916501.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41965015
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length23-63
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC4511241.0750002114856863No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC1921950.45798863648684507No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC1834160.4370688298336126No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1689440.40258296106888086No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1439690.3430691017267598No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1361860.32452270063527916No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1354110.3226759242192574No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC1232320.2936541307086391No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1218000.29024176447929306No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1174080.2797759038093993No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC987690.2353603352697479No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT950710.2265482330936853No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC917440.21862020066000218No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT892580.21269621850486647No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC845710.20152739132822903No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATT831370.19811025922426098No Hit
GGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC797880.1901298021697359No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG781980.18634093184525252No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG748110.17826992317290963No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC730740.17413076106370984No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT718200.17114255767572106No Hit
GGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCC705510.16811861022806737No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT700740.16698194913072234No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCC668450.1592874445535168No Hit
CCCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG630990.15036096138652638No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC600150.1430119827194152No Hit
GCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT582230.13874175905811068No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC573460.1366519230363673No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC566450.13498148398135923No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGT565440.13474080731294866No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTC559870.13341351123072395No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCG559800.133396830669547No Hit
CCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG554660.13217200089169515No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC533660.1271678325386039No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGC526090.12536394899418005No Hit
CCTCCGCGCGCCGGGTTTCGCCCCCGCGGCGTC522380.12447987925180057No Hit
CCTCCGCGCGCCGGGTTTCGCCCCCGCGGCGT515160.12275939851326158No Hit
TCGCCCCGGGCGTCGTCGCGCCGTCGGGTCCCGGGGG502860.11982838562073671No Hit
CCCTCCGCGCGCCGGGTTTCGCCCCCGCGGCGTC498770.1188537642605394No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTC492460.11735013081730103No Hit
CCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT479890.11435477861737928No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC473810.11290595273229379No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC471070.11225302790908093No Hit
TCTTCTGGCGCCAAGCGTCCGTCCCGCG467430.11138563872787845No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT428060.10200401453448783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)