FastQCFastQC Report
Tue 4 Jul 2023
SRR6916504.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6916504.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43517945
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length23-63
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC5065531.1640094678183908No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC2167050.49796698810111556No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC1816350.4173795430827444No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC1243290.28569593532047527No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1237770.2844274930721108No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1173300.2696129148561588No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1142930.2626341845875305No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1142760.2625951202429251No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1104380.25377576997259405No Hit
CGCGGGGCCTCGCTCCACCCCCCCATCGCCTCT1039180.23879344486510104No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1033220.2374238949012873No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT1026670.23591876868266642No Hit
ATGTACACGGAGTCGACCCAACGCGA997670.22925485107350543No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT938400.21563518222195463No Hit
GGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC900710.2069743872326692No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC780020.17924100046544017No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC775600.17822532750569908No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG772510.17751527559492988No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG765770.17596648922645589No Hit
CCCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG756150.17375590690231352No Hit
TCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT744590.1710995314691445No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC742360.17058709918402626No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATT723570.16626934015381473No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT717270.16482166150079008No Hit
TGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT709130.1629511687649773No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC696860.16013164224551504No Hit
GGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCC665390.15290014268826344No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG664930.1527944391675664No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC610880.14037427548566458No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT603020.13856812402331956No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG587600.13502475817734502No Hit
CCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG561510.12902953023172395No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT547170.12573433786912502No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTC535420.12303430228610289No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC515360.11842470962266256No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC476950.10959846564446No Hit
TCGCCGCGGCCCGGGTTCGTTTCCCGGTCAGGGAAC471200.10827717163574704No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGATT468950.1077601435453811No Hit
TGTATGAGGCCCCGGGTTCGATCCCCGGCATCT442610.10170746803416385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)