FastQCFastQC Report
Fri 7 Jul 2023
SRR6916505.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6916505.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50977727
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length23-63
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC5484731.0759071309711397No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC3017300.59188594265884No Hit
GGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC1898000.37231946414558653No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT1660880.32580503246054887No Hit
TCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAT1626850.3191295680954939No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1571250.30822284406678235No Hit
TCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1517410.2976613688562458No Hit
TCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC1480850.2904896093150642No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1401770.27497695218933554No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCG1307530.2564904472888718No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1280670.2512214795296777No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT1274010.24991502661544715No Hit
CCCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG1264140.24797888693624962No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1206990.23676810855062252No Hit
CCGTGGATCGCCTCAGCTGCGGCGGGCGTCGCGG1158410.22723845651258637No Hit
TGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCT1012520.19862007578329258No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCG974990.19125803706391223No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCC969690.1902183673273624No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCC964890.18927677964143047No Hit
CAGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC901870.17691451798154909No Hit
GCGCCGCTGGTGTAGTGGTATCATGCAAGATT890180.17462135963810235No Hit
ACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG869380.17054114633239728No Hit
GGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGCCC845480.1658528243128612No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC831290.16306925571632488No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT829740.1627652013594094No Hit
CCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCT820280.16090948896171853No Hit
AGTGCGCCCCGGGCGTCGTCGCGCCGTCGGGTCC817840.16043084855470313No Hit
CCTCGGTTGGCCCCGGATAGCCGGGTCCCC701110.13753261301744582No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCGT687670.13489616749683642No Hit
TTCCGGCCGTGCCGGTGGCGGCGGATCTTTCCCGCTC664130.1302784645537452No Hit
ATTCTTGCGACCCGGGTTCGTTTCCCGGGCGGCGC660130.12949380814880193No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG656300.12874249964106874No Hit
TCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTC651430.1277871804680503No Hit
CGCGGGGCCTCGCTCCACCCCCCCATCGCCTCT648980.12730657842002252No Hit
TCCTCGGTTGGCCCCGGATAGCCGGGTCCCCG644120.12635322088801643No Hit
ATTAAAGCATCTGGCCTACACCCAGAAGATT634800.12452497146449862No Hit
CGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT622450.12210234481423624No Hit
TCTTCTGGCGCCAAGCGTCCGTCCCGCG607110.11909318750127874No Hit
GGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT583320.11442644353287859No Hit
TCGCCGCTGGTGTAGTGGTATCATGCAAGATT578250.11343189153961299No Hit
CTTCTGGCGCCAAGCGTCCGTCCCGCG573720.1125432681610147No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCCGC535920.10512826513430071No Hit
TCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTT513630.10075576731775429No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)