FastQCFastQC Report
Wed 5 Jul 2023
SRR6939932_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6939932_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18431424
Total Bases539 Mbp
Sequences flagged as poor quality0
Sequence length25-35
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAT559040.30330808948890764No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT294580.15982487299950346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)