FastQCFastQC Report
Mon 10 Jul 2023
SRR7124015_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7124015_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43738450
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length35-75
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT2330280.5327760814569332No Hit
GTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGC2160620.493986412412877No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1817210.4154719703144487No Hit
GTAAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTCTT1780800.40714748693655123No Hit
GTTAAACTTTAGTCACTGGGCAGGCAGTGCCTCTAATACTTGTAATGCTA1615170.36927920399556907No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1564650.35772872609797557No Hit
ATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTATTTGTAA1406090.32147686989365193No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG1223800.27979958137519734No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT1179470.2696643342413826No Hit
GCTACCTTTGCACGGTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGG1070760.24480977263711903No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT1050420.24015940208214967No Hit
GCTCGTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTT1015180.2321024178954673No Hit
GTGCCAGTTACCTTGTTTTTTTTTGGTCTTTTTGTTATTTTGTCTTTTTT957910.2190086754331715No Hit
GCTTGTTCTTACTTTTAATTAGTCTTTCATCTTTCCCTTGCGGTACTAGT845460.19329903094416925No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT840720.19221531627206725No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG824750.18856406662787548No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT767800.17554348633753597No Hit
CTCGTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTT766560.17525998292120548No Hit
GCGCTTATTTGTAAGGTGGCTCTATTTCTCTTGTCCTTTCGTACTGGGAG760440.17386075638254214No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG677370.15486831380627344No Hit
GCCACATAGACGAGTTGATTCATAAAATTGTTTTTAGGTAGCTCGTTTGG674790.15427844379487615No Hit
CTTTCATCTTTCCCTTGCGGTACTAGTTCTATAGCTCCTAGATGTACGAA666090.1522893472448155No Hit
CTCGTTTAGCCGTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGC664850.152005843828485No Hit
CGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTA637990.14586479401990696No Hit
CTGGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTATAA625430.14299317877062404No Hit
GTCCTTTCGTACTGGGAGAAATCGTAAATAGATAGAAACCGACCTGGATT618210.14134245726586103No Hit
GTTCATTATGCAAAAGGTACAAGGTTTAATCTTTGCTTGTTCTTACTTTT598310.13679268469733152No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA596040.13627369054001684No Hit
GGTGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAG593190.13562208994603145No Hit
GTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGA589820.13485160082261716No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG581860.13303169179520535No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT578150.13218346786408755No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG552400.12629619933948277No Hit
CCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATC550490.12585951262561887No Hit
GGCTGCTTTTAGGCCTACAATGGTTAAAAGCTGTTTTGTTAATTATTCAC548410.12538395850790324No Hit
GTGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGC535260.12237745050407593No Hit
GCCAGTTACCTTGTTTTTTTTTGGTCTTTTTGTTATTTTGTCTTTTTTTT524360.11988536402181606No Hit
CCTCGTTTAGCCGTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATG514900.1177225073133593No Hit
CAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAG510850.11679654857453797No Hit
GTCGATATGAACTCTTAAATAGGATTGCGCTGTTATCCCTAGGGTAACTT510270.11666394213786725No Hit
CGGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGC489310.11187181987473264No Hit
GTTTTTGGTAAACAGGCGGGGTTCTTGTTTGCCGAGTTCCTTTTATCTTT481560.11009992352266713No Hit
ACGGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGG466060.1065561308185361No Hit
GGCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTA465560.10644181492485444No Hit
CTTTAATCGTTGAACAAACGAACCATTAATAGCTTCTACACCATTGGGAT464690.10624290526984838No Hit
CGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCA460440.10527122017355439No Hit
CCCCAACCGAAATTTCAAACTTATACTATAGTTTTTGGGCCATTAGGTTT453440.10367079766201133No Hit
CGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTTTACTTTGA446190.10201321720362748No Hit
CTCTATTTCTCTTGTCCTTTCGTACTGGGAGAAATCGTAAATAGATAGAA443680.10143935141734561No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)