FastQCFastQC Report
Fri 7 Jul 2023
SRR7124021_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7124021_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47931933
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length35-75
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT3283680.6850714741673364No Hit
GTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGC3257160.6795386282460171No Hit
GTTAAACTTTAGTCACTGGGCAGGCAGTGCCTCTAATACTTGTAATGCTA3217040.67116842544197No Hit
GTAAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTCTT2950520.6155645757078063No Hit
ATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTATTTGTAA2204070.4598333223907327No Hit
CGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCA1807120.3770179683761137No Hit
GGCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTA1687000.3519574309677851No Hit
GCTTGTTCTTACTTTTAATTAGTCTTTCATCTTTCCCTTGCGGTACTAGT1444870.3014420469961017No Hit
GCTCGTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTT1434700.2993202882095325No Hit
CGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTA1296250.2704355778849979No Hit
GCGCTGTTATCCCTAGGGTAACTTGGTCCGTTGATCAAAATATATCTGGG1244610.2596619668979342No Hit
GTGCCAGTTACCTTGTTTTTTTTTGGTCTTTTTGTTATTTTGTCTTTTTT1217610.25402897896898924No Hit
CGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTTTACTTTGA1147130.23932479418261723No Hit
GGGCCATTAGGTTTAATAAATTAAATAGATAAGTTATATAATTTAAGCTC1120830.23383784668145974No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA1111700.23193306224474614No Hit
CTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATC1081820.225699222270047No Hit
GGTGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAG1034840.2158978232736827No Hit
CTCGTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTT1006550.2099957036992437No Hit
CTTCACTGAAAGGTCAATTTCACTGATTAAAGATAAGAGACAGTTGGACC962480.20080141562411014No Hit
AAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTCTTTA931280.19429218512844038No Hit
GCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGAT919140.19175942685224065No Hit
GGCTGCTTTTAGGCCTACAATGGTTAAAAGCTGTTTTGTTAATTATTCAC901830.18814805570223928No Hit
CTTTAATCGTTGAACAAACGAACCATTAATAGCTTCTACACCATTGGGAT842400.17574922338308366No Hit
GTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGATATGAACTCT842070.175680375752841No Hit
GGGCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGT838300.17489384373461425No Hit
CTCTATTTCTCTTGTCCTTTCGTACTGGGAGAAATCGTAAATAGATAGAA833470.17388616478288074No Hit
GCGCTTATTTGTAAGGTGGCTCTATTTCTCTTGTCCTTTCGTACTGGGAG809400.16886446035881758No Hit
GTTTTTGGTAAACAGGCGGGGTTCTTGTTTGCCGAGTTCCTTTTATCTTT799230.1667427015722483No Hit
GTGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGC795280.1659186163011619No Hit
CTTTCATCTTTCCCTTGCGGTACTAGTTCTATAGCTCCTAGATGTACGAA790710.16496518093689233No Hit
GCGGGGTTCTTGTTTGCCGAGTTCCTTTTATCTTTTTGGATCTTTCCTTT782860.1633274418538472No Hit
GGCCATTAGGTTTAATAAATTAAATAGATAAGTTATATAATTTAAGCTCC782460.1632439901808258No Hit
GCCAGTTACCTTGTTTTTTTTTGGTCTTTTTGTTATTTTGTCTTTTTTTT760120.1585832142425802No Hit
GCTACCTTTGCACGGTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGG759330.15841839718836292No Hit
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAATGGACCTTG755800.15768193617394902No Hit
TGTACGTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCG751870.15686202348651368No Hit
CTATAATCTAAACTTACTTTTTGATTTTGTTGTTTTTTTAGCAAGTTTAA729710.15223880080112773No Hit
GGCTAGGCAAGGTGTCTTAAGCTATTTTAATGTGCTTGATACCCTCTCCT728100.15190290781721655No Hit
GTGTAAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTC727970.1518757860234846No Hit
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT724010.15104961446057266No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG718990.150002295964154No Hit
TCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTC718820.1499668290031199No Hit
CTGGCAAATAGTTTTGTTAAATTTAATTATTTAGGTTTATGGCTAAGCAT704920.147066883365626No Hit
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT693750.1447364953965032No Hit
CTGGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTATAA691580.14428377007036208No Hit
GCCGTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTG673160.14044082052772627No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA670250.13983370960649552No Hit
GGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCAT665070.1387530104408683No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT657460.13716534236163602No Hit
GAGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGGTCTGAACT656400.1369441954281293No Hit
GTTGAGCTTGAACGCTTTCTTTATTGGTGGCTGCTTTTAGGCCTACAATG644050.13436762502359337No Hit
TGGGCCATTAGGTTTAATAAATTAAATAGATAAGTTATATAATTTAAGCT630870.131617892397538No Hit
CTCTTCACTGAAAGGTCAATTTCACTGATTAAAGATAAGAGACAGTTGGA624790.1303494269676126No Hit
GCCGAAGATAATTAGTTTGGGTTAATCGTATGACCGCGGTGGCTGGCACG620590.12947318440088781No Hit
ATTAGGTTTAATAAATTAAATAGATAAGTTATATAATTTAAGCTCCATAG617710.12887233235513368No Hit
GTTTGGTTTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTA607360.12671302031570478No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG605460.1263166248688531No Hit
GCAGGCAGTGCCTCTAATACTTGTAATGCTAGAGGTGATGTTTTTGGTAA604540.12612468602090385No Hit
GGCGGGGTTCTTGTTTGCCGAGTTCCTTTTATCTTTTTGGATCTTTCCTT601110.12540908792474528No Hit
TTGGGTAACCAGCTATCACCAAGCTCGTTAGGCTTTTCACCTCTACCTAA592930.12370250121145751No Hit
GCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTT588370.12275115213901346No Hit
GGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGACC575660.12009947522875825No Hit
TGTAAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTCT571980.1193317198369613No Hit
CTGGGTCAATAAGATATGTTGATTTTACTTTGACTTGTAAGTCTAGGTTA568960.11870165970564968No Hit
TGGGTAACCAGCTATCACCAAGCTCGTTAGGCTTTTCACCTCTACCTAAA567700.11843878693563224No Hit
TCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCATTATGCA561740.11719535700761327No Hit
GTCGATATGAACTCTTAAATAGGATTGCGCTGTTATCCCTAGGGTAACTT560230.11688032694195746No Hit
GGACTTTAATCGTTGAACAAACGAACCATTAATAGCTTCTACACCATTGG559160.1166570937166252No Hit
CTCGTTTAGCCGTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGC550170.11478151736546906No Hit
GGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTATAAAG550140.11477525848999247No Hit
CGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTCTAATACTTGTAA549450.11463130435403054No Hit
CTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTTCATTATGCAA546640.11404505635105515No Hit
GTATATATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTAT545870.11388441188048895No Hit
GTCCTTTCGTACTGGGAGAAATCGTAAATAGATAGAAACCGACCTGGATT540280.11271817475001478No Hit
GGTGGCTCTATTTCTCTTGTCCTTTCGTACTGGGAGAAATCGTAAATAGA531620.1109114460291013No Hit
GTAGGACTTTAATCGTTGAACAAACGAACCATTAATAGCTTCTACACCAT529930.11055886271058586No Hit
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG527350.11002059941959778No Hit
GCTGCTTTTAGGCCTACAATGGTTAAAAGCTGTTTTGTTAATTATTCACT525960.1097306048558484No Hit
GTTCATTATGCAAAAGGTACAAGGTTTAATCTTTGCTTGTTCTTACTTTT515560.1075608613572918No Hit
CCTCGTTTAGCCGTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATG514620.10736474992569149No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT512580.10693914639328232No Hit
CTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGA509510.10629865480284303No Hit
GGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGCG497910.1038785562852222No Hit
GGTGGCTGCTTTTAGGCCTACAATGGTTAAAAGCTGTTTTGTTAATTATT490910.1024181520073476No Hit
TTCGGGGTTTCTAGCTGTAATTCTTTTAGTTAGAAGTTTTCTAGTTAGTT480510.10024840850879099No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)