FastQCFastQC Report
Fri 7 Jul 2023
SRR7124023_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7124023_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35762255
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length35-50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA6065521.696067543839168No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA3685261.0304887093948634No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA3560950.9957285970921017No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3465840.9691335180066245No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA2620160.7326607340616524No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA2513180.702746513048464No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1875520.5244412020438868No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1726170.4826792941328784No Hit
GCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA1647880.4607874978800973No Hit
CCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA1598480.4469740512727735No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1411450.39467589501836503No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1334250.3730888893891059No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA1270200.35517894495187735No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1106190.30931774296671166No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA1098630.30720378231182566No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1018410.2847723109183132No Hit
GGGCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAA1016980.28437244799020645No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA993600.2778348289278738No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAA909990.2544554307327656No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA905140.25309925227030566No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA883520.24705377219641209No Hit
TTTCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA881280.2464274134838533No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA861710.24095516348172116No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA849000.23740113703680038No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA822070.22987085126483214No Hit
TTACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA819940.2292752512390508No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA811390.2268844624031678No Hit
GGCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAA806670.22556463511599034No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA789700.2208194086195068No Hit
GTTCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA766440.2143153444882041No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA745800.20854389635105505No Hit
GGGCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAAA728950.20383222478560148No Hit
GCGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA700880.19598316716884884No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG688690.19257454542505778No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAA686140.19186150314067166No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCAAAAAAAAAAA664120.1857041732966783No Hit
GGGGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA661050.18484572631116242No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA659790.18449339953534807No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA634850.1775195663696263No Hit
AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA618860.17304837180988725No Hit
GTACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA614680.17187954171234449No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA612560.1712867379308156No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAA604680.1690832974598498No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA586470.16399133667605692No Hit
GGGGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA571360.15976621161053742No Hit
CGCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAA568330.15891894960203154No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAA547860.15319503761717487No Hit
GGCCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA533040.14905100363497772No Hit
CCGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA513430.1435675686558356No Hit
CGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA505550.1413641281848698No Hit
GCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA501600.14025961170513437No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAA486960.13616591011948212No Hit
ATACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA485500.13575765845861787No Hit
TATCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA479960.1342085391427358No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA474020.13254757005675397No Hit
CGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA462820.1294157764939599No Hit
GAGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA462670.12937383283017248No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA461580.12906904220665055No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA458120.1281015416952874No Hit
AGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA455250.12729901959482143No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAC453970.1269411003305021No Hit
AATCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA452900.12664190219548516No Hit
GCGCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAA440940.12329759406950148No Hit
AAGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA439080.12277749263853747No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA431120.1205516822135517No Hit
GCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAA424240.11862786616783534No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAA420840.11767714312198713No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAA411900.11517730076025688No Hit
CCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA409410.1144810359413857No Hit
AGACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA393900.11014406110576641No Hit
CCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAA389580.1089360835886887No Hit
CGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA386830.10816711641925265No Hit
GGCCGACGAAGCCGAGCGCACGGGGTCGGCGGCGAAAAAAAAAAAAAA384350.10747364784463395No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA378380.10580429002589463No Hit
GCGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA375550.10501295290243863No Hit
ACGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA371740.10394758384223814No Hit
GGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA371260.1038133641181184No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAA369470.10331283639692183No Hit
CCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA368090.10292695469007757No Hit
GGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA365540.10221391240569143No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCAAAAAAAAAAAA364580.10194547295745192No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)