FastQCFastQC Report
Fri 7 Jul 2023
SRR7124024_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7124024_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33588266
Total Bases1.6 Gbp
Sequences flagged as poor quality0
Sequence length35-50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11231303.343816557841956No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3668821.0922921713195912No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA2836660.8445389827507023No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA1796700.5349189505644619No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1750680.5212177371704749No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1684270.5014459513926679No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA1566590.4664099063643238No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA1366560.40685637061466645No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA1361470.40534096044136364No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1319950.39297950063870524No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAA1228360.36571104920986397No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA1173780.34946132676214964No Hit
AGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1097500.3267510147740285No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1039060.30935208146797455No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA893350.2659708601807548No Hit
GCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA887690.2642857478858837No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA879210.2617610566737801No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA877870.2613621078265844No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA877290.2611894284748132No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA861270.2564199056896834No Hit
CGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA857060.25516649177424044No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA846250.25194810592484884No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCAAAAAAAAAAAA836070.24891728557824333No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCAAAAAAAAAAA792440.23592763020276186No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA779760.2321525023054182No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA717300.21355672245777735No Hit
GGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA703360.2094064635548617No Hit
CCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA700390.20852222618458482No Hit
GGGGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAAAAAAAAAAAA671180.1998257367617608No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA665670.19818528291993398No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG655660.19520507548677862No Hit
GCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA647910.19289772207949052No Hit
CGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA626010.18637758793502468No Hit
TTTCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA612740.1824268034557068No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA597970.1780294344459461No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA594010.17685045128557694No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA567940.16908881214647994No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA538700.16038339103304708No Hit
GTTCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA536460.15971649146758574No Hit
GCGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA533650.1588798897805561No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA532000.15838864679706896No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA515260.1534047634373266No Hit
ATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA508250.15131772506505695No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA506270.15072823348487235No Hit
TTACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA504570.15022210435037045No Hit
CCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA474060.14113857500116261No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAA466830.138986037564428No Hit
GCGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAA462370.13765819289391124No Hit
GGCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA426250.12690443740084706No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAGAAAAAAAAAAAAAA412730.12287922216645539No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA403730.12019971498379821No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAA394170.1173534829097757No Hit
CGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA392550.11687117161689739No Hit
GTACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA383060.11404578015429556No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAA381670.11363194515608517No Hit
GGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAAA366330.10906487402475615No Hit
GCGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA362730.10799307115169328No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAA358420.10670988493422078No Hit
CGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA357020.10629307270580744No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAA351190.10455734749748617No Hit
GGGGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA349520.10406015005359312No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA346770.10324141174778122No Hit
TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA337740.10055297287451517No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)