FastQCFastQC Report
Fri 7 Jul 2023
SRR7124028_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7124028_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43704765
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length35-50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3558690.8142567520955667No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA2540370.5812569865093657No Hit
GGGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA2007270.45927944012512134No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1820440.41653124092990773No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA1766720.40423967501026487No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1683120.3851113259618259No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1506100.3446077332757652No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAA1213310.2776150380856641No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA1184410.2710024867997803No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA1135730.2598641132151151No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA1128230.2581480531928269No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAC1066780.24408780141021236No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA1048500.23990519111588862No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA964640.22071735198667697No Hit
TGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA964080.22058921950501276No Hit
GGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA876390.20052504572441932No Hit
GCGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA858720.19648200831190832No Hit
AGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA858380.19640421359089794No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAA824470.18864533421012558No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCAAAAAAAAAAAA821170.18789026780031878No Hit
GGGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCAAAAAAAAAAA811470.18567083017149275No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA802740.1836733363055493No Hit
GCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA790300.18082696474858062No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA737100.16865437899048308No Hit
CGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA733350.16779634897933898No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAC695970.15924350582825464No Hit
GGGCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAC682830.15623696866920575No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA675710.15460785568804683No Hit
CGCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAA674250.15427379600370805No Hit
ACGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA669670.15322585535009742No Hit
TGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA668000.15284374598513456No Hit
CCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA652060.14919654641776475No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAAAC646400.1479014931209446No Hit
GCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA641260.14672541998566974No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA626160.14327041914079622No Hit
AGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA612370.14011515677981565No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAAAC588800.13472215214977132No Hit
GGGGGTGCGCCGCGACCGGCTCCGGGACGGCCGGGAAAAAAAAAAAAAA585980.13407691358139096No Hit
CGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA579280.13254389996148017No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA578920.13246152908041034No Hit
GGCCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAAAA576120.13182086667208942No Hit
CCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA574550.13146163810742376No Hit
GGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA544800.12465460001901395No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAC528540.12093418189069315No Hit
GGGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAAAA524110.11992056243752827No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAA516060.1180786580136056No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG513560.11750663800617622No Hit
GGCCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAA501540.11475636581045569No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAA500470.1145115412472759No Hit
GCGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAC497390.11380681259812288No Hit
CCGCTTTCGCCGAATCCCGGGGCCGAGGAAGCCAAAAAAAAAAAAAA481400.11014817263060447No Hit
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA475460.10878905309295221No Hit
GGCGCCGCGACCGGCTCCGGGACGGCCGGGAAGGCCCGAAAAAAAAAAA446510.1021650614069198No Hit
CGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA437630.10013324634053061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)