FastQCFastQC Report
Fri 7 Jul 2023
SRR7182550_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7182550_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36943774
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAA7528542.037837282135821No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAA4794961.2979074633793504No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAAAA2612830.7072450150869806No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1928180.5219228549849835No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAAA1874680.5074413891769692No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGAAAAAAAAAAAAAAAAAAA1714340.46404030080954917No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCAAAAAAAAAAAAAAAAAAAA1394790.37754399428710234No Hit
CATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAA1255980.33997068085139326No Hit
TCATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAA1233650.33392636063657166No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCAAAAAAAAAAAAAAAAAA1172610.3174039555352412No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGATAAAAAAAAAA1080360.2924335775765627No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGAAAAAAAAAAA1018620.27572169535251057No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA895680.24244409897050584No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAA804290.2177065071911711No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTAAAAAAAAA804080.21764966405435462No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGATAAAAAAAAA786070.21277468836832963No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCAAAAAAAAAAAAAAAAAAAA748810.20268909180745856No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGAAAAAAAAAA733650.19858555869251474No Hit
ACATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAA691970.18730354944245814No Hit
TTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAA634380.17171499587454167No Hit
TTTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAA626570.1696009725481755No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA619360.1676493581841422No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAAAAAAAAAAA599400.16224655337053545No Hit
TCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGAAAAAAAAAAAAAAAAA579090.15674900999556787No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTAAAAAAAA558030.1510484554176842No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTGAAAAAAAAA512010.13859168800675317No Hit
TCATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAA477920.12936415213020738No Hit
TCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCAAAAAAAAAAAAAAAAAA477040.12912595231878585No Hit
TCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCCCGTGGATCG471900.12773464887480093No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGAAAAAAAAAAAAA470770.12742877866240737No Hit
CATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAAA465440.12598604571368371No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAAAAA444420.12029631839995557No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAAAAAAAA435940.11800093839898435No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGAAAAAAAAAAAAAAAAAAAAGA424110.11479877502498796No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCAAAAAAAAAAAAAA397120.10749307853604778No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTGAAAAAAAA396150.10723051738027632No Hit
ATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGGGCGCCAAAAAAAAAAAA389850.10552522327578119No Hit
ACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAAAAAAAAAAAGAT380750.10306202068039935No Hit
TGCGCGCGGGTCGGGGGGCGGGGCGGACTGTAAAAAAAAAAAAAAAAAAA371970.10068543619826173No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)