FastQCFastQC Report
Fri 7 Jul 2023
SRR7182552_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7182552_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30514113
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length50
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAA5542371.8163300371863995No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAA3128251.0251813644394643No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGAAAAAAAAAAAAAAAAAAA2080500.6818156569060356No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAAAA1864690.6110910056602333No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCAAAAAAAAAAAAAAAAAAAA1723390.5647845637852884No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1460800.4787293014219355No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCAAAAAAAAAAAAAAAAAA1270930.41650563462224843No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAAA1142100.37428582636500035No Hit
TCATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAA911460.2987011288841986No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGATAAAAAAAAAA777230.2547116476890546No Hit
CATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAA766380.2511559159527265No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGAAAAAAAAAAA696140.2281370590716499No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTAAAAAAAAA681870.2234605344746544No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAA677990.22218899169705505No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCAAAAAAAAAAAAAAAAAAAA676720.2217727908394388No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA631010.20679283713736No Hit
ATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAAAAAAAA597500.19581103340608327No Hit
ACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAAAAAAAAAAAGAT515870.169059477494889No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCTAAAAAAAAAAAAAAAAAAA512510.16795834766686485No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGATAAAAAAAAA487910.15989650428311647No Hit
TCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGAAAAAAAAAAAAAAAAA486770.15952290666289398No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGTAAAAAAAAAAAAAAAAAA465030.15239833450180906No Hit
ACATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAA463230.15180844352251038No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGAAAAAAAAAAAAAAAAAAAAGA459840.15069748217816456No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA448990.14714175044183653No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCCAAAAAAAAAAAAAAAAAAA447800.14675176696107797No Hit
TCGGCGGCGGCGGCGACTCTGGACGCGAGCCGGGCCCTTCCCGTGGATCG442420.14498864836739642No Hit
TTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAA437670.1434319916164694No Hit
ATCTGAGGGTCCAGGGTTCAGGTCCCTGTTCGGGCGCCAAAAAAAAAAAA432740.1418163457676125No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGAAAAAAAAAA430670.14113797114141904No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGTGAAAAAAAAAAAAAAAAAAA430590.14111175376456134No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCAAAAAAAAAAAAAAAAAAAAGAT418860.1372676308827984No Hit
TCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCAAAAAAAAAAAAAAAAAA415140.1360485228589145No Hit
ATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTGAAAAAAAAA411120.13473109967181415No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGACAAAAAAAAAAAAAAAAAAAA393200.12885840725568526No Hit
TATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTTAAAAAAAA389700.1277113970181601No Hit
TCGTCGCGCGCGCGTCCGCTGGGGGCGGGGAGCGGTAAAAAAAAAAAAAA384890.12613507723458978No Hit
TCCCTGGTGGTCTAGTGGCTAGGATTCGGCGAAAAAAAAAAAAAAAAAAA382450.1253354472404294No Hit
TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGAAAAAAAAAAAAAAAAAA380460.12468328999109364No Hit
TTCCCTGGTGGTCTAGTGGTTAGGATTCGGCAAAAAAAAAAAAAAAAAAA380150.12458169765576999No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCAAAAAAAAAAAAAAAAAAAG356970.11698521271124611No Hit
AGGGGGGTCTCCCCCGCGGGGGCGCGCCGGCAAAAAAAAAAAAAAAAAAA356450.11681479976167093No Hit
TCCCTGGTGGTCTAGTGGCTAGGATTCGGCAAAAAAAAAAAAAAAAAAAA337340.1105521238647835No Hit
TCATTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGCAAAAAAAA333540.10930679846404187No Hit
TTTGATCATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAA330740.10838919027402172No Hit
TACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAAAAAAAAAAA312590.10244112289942689No Hit
TCGGGACCGGGGTCCGGTGCGGAGTGCCCTTCGTAAAAAAAAAAAAAAAA308160.10098933565593074No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)