FastQCFastQC Report
Thu 28 Sept 2023
SRR7252581_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7252581_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95323153
Total Bases3.3 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3073608532.24409184198932No Hit
TCCGTGTTAGTATAGTGGTGAGTATTCCCAGANNN2887880.30295682728832946No Hit
TCCGTGTTAGTATAGTGGTGAGTATTCCAGANNNN2438390.2558024911324534No Hit
ATACCGCGTAGAATAAACCAGANNNNNNNNNNNNN2020280.21194011490576695No Hit
AGGTGGGAGCTCCGGCGACAGANNNNNNNNNNNNN2003830.21021440614747605No Hit
GTGTAATGGCTATCACTGTGAGANNNNNNNNNNNN1943610.20389694831013405No Hit
TAGGTGGGAGCTCCGGCGACAGANNNNNNNNNNNN1852780.1943683084003736No Hit
GTGTAACGGTTAGCACTCTGAGANNNNNNNNNNNN1754890.18409902995969932No Hit
AATATTCCCGCACTTTGTGAGANNNNNNNNNNNNN1741830.18272895358381608No Hit
AATGAATCCAGAGACGTTGGCACAGANNNNNNNNN1437130.15076400169012455No Hit
AAAGCGAGAGCTTAGAGTCGAGAGANNNNNNNNNN1337700.1403331675359081No Hit
GGGAGAGCGACGCTCAGACAGANNNNNNNNNNNNN1307730.13718912550028636No Hit
ATACCGCGTAGAATAAACCAGTTCTAGANNNNNNN1292570.1355987458786639No Hit
AAAGCGAGAGCTTAGAGTCGAGTTAGANNNNNNNN1271290.13336633965517275No Hit
ATCTGACGAGCGCGGCGAGCAGANNNNNNNNNNNN1262040.13239595631084508No Hit
ATGGGTGACCGGTTGGGAATACCTCGTGCGCAGAN1223070.12830775750776938No Hit
AAATGAATCCAGAGACGTTGGCACAGANNNNNNNN1206200.12653798810033065No Hit
GTGCGAAAGGGAAGTGGGTTAGANNNNNNNNNNNN1200660.125956807156809No Hit
TGCGAGAGGTCCCGGGTTCAGANNNNNNNNNNNNN1183160.12412094677564851No Hit
GCCTGCCACGCGGGAGGCCCGGGTTCAGANNNNNN1163360.12204380188724978No Hit
AATCCAGAGACGTTGGCACAGANNNNNNNNNNNNN1126620.11818954414988771No Hit
ATCTGACGAGCGCGGCGAGCCAGANNNNNNNNNNN1095820.11495842987904524No Hit
TGACCTCAGATTAGTCGAGAGCACTCGCTGAGANN1032100.10827379996547112No Hit
ATGAATCCAGAGACGTTGGCACAGANNNNNNNNNN989450.10379954595081428No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)