FastQCFastQC Report
Thu 28 Sept 2023
SRR7293731.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7293731.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15341643
Total Bases767 Mbp
Sequences flagged as poor quality0
Sequence length50
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCGGCCGAGGTGGGATCCCGAGGCGGACTCAGTAAGATCGGAAGAGC218560.1424619253622314No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCGGTAGCAGTAAGATCGGAAGAGC205440.1339100381882175No Hit
CCACCGGCCGAGGTGGGATCCCGAGGCTGGGGCAGTAAGATCGGAAGAGC188500.12286819605957458No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)