FastQCFastQC Report
Sun 1 Oct 2023
SRR7471232_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7471232_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44878111
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length15-45
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTTTTCTTCTTAACAGCTTATCACCCCGGAAT6796671.5144732807492722No Hit
TCCGATATAGTGTAACGGCTATCACATCACGC6240481.390539811267903No Hit
ACCATACGCGAAACTCAGGTGCTGCAATCT5046841.1245660495826129No Hit
ATGTACACGGAGTCGACCCGCAACGCGA4058690.9043807570242874No Hit
TGGTCCTATAGTGTAGTGGTTATCACTTTCGGT2374160.5290240491628535No Hit
TCCAGGGGGCATGCCTGTTTGAGCGTCATT2259760.5035327801564553No Hit
TGCTGGCTCCGGTGCGCTTGTGACGGCC2199910.49019665734148216No Hit
TTGATGTTGACGCAATGTGATTTCTGCCCA2132050.475075700044505No Hit
TCGATGAAACCCTGGTTCGATTCTAGGAGATGGC2019100.4499075284162473No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA1958340.43636863414326865No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCG1739550.387616582168532No Hit
ATCTTTTCTTCTTAACAGCTTATCACCCCGGAA1706890.38033909225813894No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC1665500.3711163333055618No Hit
TTTGCTGGCTCCGGTGCGCTTGTGACGGCC1624710.36202726981980143No Hit
TCTTTTCTTCTTAACAGCTTATCACCCCGGAAT1607390.35816792734435726No Hit
AAGCGTGTTACCTATACTCTACCGTCAGGGT1558300.34722940990096485No Hit
TTCCGATATAGTGTAACGGCTATCACATCACGC1522910.3393436056165555No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAGC1509400.3363332293553978No Hit
TCCAGGGGGCATGCCTGTTTGAGCGTCATTT1486180.33115921478958865No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCCA1391210.30999745065027356No Hit
ACGTGGGTTAGTCGATCCTAAGAGATGGGG1293030.2881204157634888No Hit
TGCTGGCTCCGGTGCGCTTGTGACGGC1291980.28788644869655944No Hit
TTGCTGGCTCCGGTGCGCTTGTGACGGCC1290740.2876101447318048No Hit
AGCGTGTTACCTATACTCTACCGTCAGGGT1287630.28691715656213784No Hit
TCCGATATAGTGTAACGGCTATCACATCACG1281660.2855868866673109No Hit
ACGTAGAGTTAAGGTGCCGGAATACACGCT1276250.2843813992081797No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC1197610.26685838002406115No Hit
ATCTTTTCTTCTTAACAGCTTATCACCCCG1160040.25848681554355085No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGCT1154140.2571721434531859No Hit
TCCTTGTTAGCTCAGTTGGTAGAGCTTTCGGC1091320.24317422807746966No Hit
ACGTGGGTTAGTCGATCCTAAGAGATGGG1048410.23361277394229005No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAG1020980.2275006628509832No Hit
TAGCGTGTTACCTATACTCTACCGTCAGGGT988440.2202499120339535No Hit
TAGTCTAACGTCTATGCGAGTGTTTGGGTG921800.20540080218617046No Hit
GAAGCGGTGGCTCAATGGTAGAGCTTTCGACT897720.20003515745125725No Hit
TTTGCTGGCTCCGGTGCGCTTGTGACGGC884590.19710945498575017No Hit
TGGACGTGGGTTAGTCGATCCTAAGAGATGGGG838090.1867480563074502No Hit
ATGCCCTGACGAGTAGGCAGGCGTGGAGGTC825090.18385132119308675No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGCTT807980.18003877213102842No Hit
TTGACCTCAAATCAGGTAGGAGTACCCGCTGAA803180.17896920839649422No Hit
ATGCCCTGACGAGTAGGCAGGCGTGGAGGTCA790450.17613263624219833No Hit
TATACGCGAAACTCAGGTGCTGCAATCT759380.16920943931886973No Hit
TCCAGGGGGCATGCCTGTTTGAGCGTCA749750.1670636270764605No Hit
TACCATACGCGAAACTCAGGTGCTGCAATCT740920.16509607545647365No Hit
ACCATACGCGAAACTCAGGTGCTGCACTCT730750.16282993729392933No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCG724990.1615464608124883No Hit
AAGAGGTGCACAATCGACCGATCCTGA696620.15522489348983518No Hit
TCCGATGTAGTGTAACGGCTATCACATCACGT680750.1516886483925315No Hit
ACGTAGAGTTAAGGTGCCGGAATACACGCTC678820.15125859464093755No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGCCA670010.14929549953651125No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGC660970.1472811545031385No Hit
TTGCTGGCTCCGGTGCGCTTGTGACGGC659510.1469558288672177No Hit
ACGCAGATGTCCTAAGGGGGGCTCATGGAGA656200.14621827554194516No Hit
GTGATGTTGACGCAATGTGATTTCTGCCCA653860.14569686322135975No Hit
TTGTCCGCGCGAGTTCGAACCTCGCATCCTTCACC647170.1442061587663527No Hit
ACCATGAAAGTGTGGCCTATCGATCCTTTAGT639070.14240126996432628No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCC632990.14104648923391627No Hit
TACGCGAAACTCAGGTGCTGCAATCT628900.14013513180178194No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA613510.13670584307793168No Hit
ATTTTCCACGTTCTAGCATTCAAGGTCCCA611260.1362044850773688No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGCC606420.13512600831171345No Hit
TTCCAGGGGGCATGCCTGTTTGAGCGTCATT601390.13400519464823285No Hit
TTTGTGCCCTCTGCTCCTTGTGGGTAGGGGA587680.13095025323146958No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGC583830.13009237398606194No Hit
AAGCGTGTTACCTATACTCTACCGTCAGGGTT579450.1291163970782995No Hit
TCCAGGGGGCATGCCTGTTTGAGC576430.12844346322865505No Hit
ACGCGAAACTCAGGTGCTGCAATCT564670.1258230320790463No Hit
CCGATGAAACCCTGGTTCGATTCTAGGAGATGGC564650.12581857556348572No Hit
TTGACCTCAAATCAGGTAGGAGTACCCGCTGAAC563430.12554672811429163No Hit
TGGACGTGGGTTAGTCGATCCTAAGAGATGGG562950.1254397717408382No Hit
GCCTTGTTGGCGCAATCGGTAGCGCTTATGA562160.12526373937619611No Hit
AACTTTGAAGACTGAAGTGGGGAAAGGTTCCACG558990.12455738165984749No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGCT552840.12318700312497555No Hit
TGCAAGAGTTCGAATCTCTTAGCAACCACCA543300.12106124520258885No Hit
TGATGTTGACGCAATGTGATTTCTGCCCA516810.11515859034262829No Hit
TTTCCACGTTCTAGCATTCAAGGTCCC506900.11295038688237122No Hit
TCCAACGGGGCCTTTCCTTCTGGC506370.11283228922001642No Hit
TCTTTTCTTCTTAACAGCTTATCACCCCGGAA501360.11171593207209635No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGC497760.1109137592711957No Hit
AACGCAGATGTCCTAAGGGGGGCTCATGGAGA494500.11018734723482458No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA491380.10949213080737735No Hit
ACTTTGAAGACTGAAGTGGGGAAAGGTTCCACG484590.10797914377456751No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGCTT477000.10628789611933531No Hit
AAAAAAAAAAAAAAA475320.10591354881224835No Hit
TTGATGCCCTGACGAGTAGGCAGGCGTGGAGGTCA466050.10384795384992919No Hit
TCAAGCGTGTTACCTATACTCTACCGTCAGGGT453720.10110051200684449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)