FastQCFastQC Report
Sun 1 Oct 2023
SRR7471233_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7471233_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33529683
Total Bases978.8 Mbp
Sequences flagged as poor quality0
Sequence length20-45
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTACACGGAGTCGACCCGCAACGCGA1246255837.16873195609992No Hit
ATGTATTTATTAGATAAAAAATCAATG7230892.156563782604208No Hit
AGAGATGTATTTATTAGATAAAAAATCAATG5137431.5322035701918206No Hit
AGAGATGTATTTATTAGATAAAAAATCA4613761.3760225529122956No Hit
TGATGTATTTATTAGATAAAAAATCAATG4189971.2496300665890578No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA3510791.0470692490591098No Hit
AAGAGGTGCACAATCGACCGATCCTGA2461240.7340480970249555No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA2179960.6501582493338813No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCT1950900.5818426616201532No Hit
ACACGGAGTCGACCCGCAACGCGA1706940.509083250205497No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC1360860.40586724306340743No Hit
GCCAGATCGGGGTTCAATTCCCCGTCGCGGA1206810.3599228778870352No Hit
ACGGAGTCGACCCGCAACGCGA1167170.34810051738335845No Hit
ATGTACACGGAGTCGACCCGCAACGCG1138980.339693041535764No Hit
AGAGATGTATTTATTAGATAAAAAATC1091540.32554438406113173No Hit
TAGAGATGTATTTATTAGATAAAAAATCAATG963090.2872350448407162No Hit
TACACGGAGTCGACCCGCAACGCGA961930.2868890827270869No Hit
ATGTACACGGAGTCGACCCGCAACGC905600.27008904319196814No Hit
ACGTTCTAGCATTCAAGGTCCCA810090.24160383502581875No Hit
ACGTGGGTTAGTCGATCCTAAGAGATGGG746750.22271311064885405No Hit
TAGAGATGTATTTATTAGATAAAAAATCA726660.21672140473263643No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACC722550.2154956251748637No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA635710.18959618556489186No Hit
AGAGATGTATTTATTAGATAAAAAATCAA577070.17210720423452855No Hit
ACTATGCCGACTAGGGATCGGGTGGTGT560250.16709075358690387No Hit
TGTACACGGAGTCGACCCGCAACGCGA513670.15319858526547955No Hit
ATTTATTAGATAAAAAATCAATG513420.1531240244651284No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA491890.14670284833888825No Hit
AGAGATGTATTTATTAGATAAAAAATCAAT445990.13301348539441904No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC431410.12866509951794058No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAG430020.12825054146798823No Hit
AGGTACACGGAGTCGACCCGCAACGCGA411600.12275690169811626No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCT400150.11934201704203408No Hit
TCCGATATAGTGTAACGGCTATCACATCACG398370.11881114414353396No Hit
ACGCGAAACTCAGGTGCTGCAATCT397180.11845623473386252No Hit
TTGATGTATTTATTAGATAAAAAATCAATG386950.11540520678349389No Hit
CAAGAGGTGCACAATCGACCGATCCTGA372530.11110453981924015No Hit
AAGAGGTGCACAATCGACCGATCCTGAT368070.10977437514097584No Hit
TCCTATAGTGTAGTGGTTATCACTTTCGGT358270.10685159176721117No Hit
TACGCGAAACTCAGGTGCTGCAATCT357530.1066308917981718No Hit
TATGTACACGGAGTCGACCCGCAACGCGA351050.10469827585307026No Hit
AGATGTATTTATTAGATAAAAAATCAATG346490.10333828685466545No Hit
ATGTACACGGAGTCGACCCGCAACGAGA345720.10310863958958397No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)