FastQCFastQC Report
Sun 1 Oct 2023
SRR7471250_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7471250_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19642215
Total Bases577.7 Mbp
Sequences flagged as poor quality0
Sequence length15-50
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTACACGGAGTCGACCCGCAACGCGA317365216.157302015073146No Hit
ATGTACACGGAGTCGACCCGCACCGCGA3139081.5981293352099037No Hit
TCCGATATAGTGTAACGGCTATCACATCACGC3134341.5957161654120984No Hit
TTCCGATATAGTGTAACGGCTATCACATCACGC2791831.4213417376808062No Hit
TCCTTGTTAGCTCAGTTGGTAGAGCTTTCGGC2791071.4209548159410739No Hit
AAAAAAAAAAAAAAA1716740.8740052993005117No Hit
TGGTCCTATAGTGTAGTGGTTATCACTTTCGGT931440.4742031384953276No Hit
GTTTAGTGGTAAAATCCAACGTTG823050.41902097090373974No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGCTT756780.3852824134141694No Hit
GCCTTGTTGGCGCAATCGGTAGCGCTTATGA713700.36335006006196346No Hit
TATGTACACGGAGTCGACCCGCAACGCGA692470.3525417067270672No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGCT676430.34437562158850216No Hit
TCCGATGTAGTGTAACGGCTATCACATCACGT622490.3169143602185395No Hit
TTTGCTGGCTCCGGTGCGCTTGTGACGGCC584530.2975886375340052No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGCT561280.28575188694350406No Hit
ACCATACGCGAAACTCAGGTGCTGCAATCT555620.28287033819760143No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGCTT553260.28166884437422157No Hit
TACACGGAGTCGACCCGCAACGCGA536810.27329402513922185No Hit
TCCGATGTAGTGTAACGGCTATCACATCACGTT534300.272016165183No Hit
ATGTACACGGAGTCGACCCGCAACGCG532410.2710539519091915No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGCCA516990.26320351345303983No Hit
TCCGATATAGTGTAACGGCTATCACATCACG516930.263172966999903No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCG512780.2610601706579426No Hit
TCCGATATAGTGTAACGGCTATCACATCCCGC502530.2558418182470765No Hit
TCCGATATAGTGTAACGGCTATCCCATCACGC497300.2531791857486541No Hit
ATGTACACGGAGTCGACCCGCAACGCGC486240.24754845622044155No Hit
TTCCGATATAGTGTAACGGCTATCACCTCACGC477100.2428952131926058No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCG476500.24258974866123803No Hit
TTCCGATATAGTGTAACGGCTATCACATCACG472080.24033949328016213No Hit
GTCTAGTGGTATGATTCTCGCT467850.23818596833401934No Hit
TTGTCCGCGCGAGTTCGAACCTCGCATCCTTCACCA450710.22945986488794673No Hit
GTTTAGTGGTAAAATCCAACGTTGC411650.20957412389590482No Hit
AATGTACACGGAGTCGACCCGCAACGCGA380830.19388342913464698No Hit
ACCTCCCCTGGAGCACCA328820.16740474534058403No Hit
TGTACACGGAGTCGACCCGCAACGCGA304410.15497742998943856No Hit
GCCCAGTTGGTTAAGGCACCGTGC303850.15469232976016198No Hit
TCGATGAAACCCTGGTTCGATTCTAGGAGATGGC298040.1517344148814174No Hit
TTGTCCGCGCGAGTTCGAACCTCGCATCCTTCACC294180.14976925972961808No Hit
TCCTTGTTAGCTCAGTTGGTAGCGCTTTCGGC290270.14777864920020475No Hit
AAAAAAAAAAAAAAAA289850.1475648240282473No Hit
TGCTGGCTCCGGTGCGCTTGTGACGGCC286360.14578803867079146No Hit
GCGCAAGTGGTTTAGTGGTAAAATCCAACGTTG286120.14566585285824435No Hit
AGATGCAAGAGTTCGAATCTCTTAGCAACCACCA283110.1441334391258827No Hit
TTCCGCTATAGTGTAACGGCTATCACATCACGC278530.14180172653644205No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGC274610.13980602493150596No Hit
TTGATGTTGACGCAATGTGATTTCTGCCCA260960.13285670684288917No Hit
GCTTCAGTAGCTCAGTAGGAAGAGCTTCAGTC257640.13116646976932084No Hit
GCCTTGTTGGCGCAATCGGTAGCGCTTATGAC255950.13030607800596827No Hit
ATCCTGTCTGTGACGCCA252900.12875329997151544No Hit
ATGTACACGGAGTCGACCCGCAACGC239850.12210944641426642No Hit
GAAGCGGTGGCTCAATGGTAGAGCTTTCGACT236530.1204192093406981No Hit
TGGTCTCTTGGCCCAGTTGGTTAAGGCACCGTGC230580.11739001940463435No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCGCTTG229810.11699800658937906No Hit
GCTTCAGTAGCTCAGTAGGAAGAGCTTCAGT227560.1158525145967499No Hit
CCGATGAAACCCTGGTTCGATTCTAGGAGATGGC226440.11528231413819674No Hit
GCGCAAGTAGTTTAGTGGTAAAATCCAACGTTG226290.11520594800535479No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCGC214440.10917302351084132No Hit
TTCCGATGTAGTGTAACGGCTATCACATCACGT213500.10869446241169847No Hit
TTTCCGATATAGTGTAACGGCTATCACATCACGC211450.10765079192952526No Hit
TCCGATGTAGTGTAACGGCTATCACATCACGTTC207600.10569072785324873No Hit
CTCCGATATAGTGTAACGGCTATCACATCACGC204090.10390376034474728No Hit
GTCTAGTCGGTTATGGCATCTGCT202580.10313500794080506No Hit
TGGGCGTGTGGTCTAGTGGTATGATTCTCGCT200750.10220334112013335No Hit
GTCTAGTCGGTTATGGCATCTGCTT197340.10046728436685984No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)