FastQCFastQC Report
Sun 1 Oct 2023
SRR7471262_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7471262_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34041353
Total Bases991.2 Mbp
Sequences flagged as poor quality0
Sequence length15-45
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTACACGGAGTCGACCCGCAACGCGA25581147.514724811319925No Hit
TCCAACGGGGCCTTTCCTTCTGGC7167862.105633110411328No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA5120501.5041999065078289No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC3538681.039523899064764No Hit
TCCAACGGGGCCTTTCCTTCTGGCT3504571.0295037332975572No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGC2640360.7756330954295501No Hit
TCCGATATAGTGTAACGGCTATCACATCACGC2388690.7017024264576088No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAG2339020.6871113495400727No Hit
TCGATGAAACCCTGGTTCGATTCTAGGAGATGGC2115760.6215264123021197No Hit
ACCATACGCGAAACTCAGGTGCTGCAATCT1961050.5760787475162928No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCCA1884570.5536119554354964No Hit
ACGCGAAACTCAGGTGCTGCAATCT1808590.5312920435330523No Hit
TCCGATATAGTGTAACGGCTATCACATCACG1739280.5109315132098304No Hit
TCCTTGTTAGCTCAGTTGGTAGAGCTTTCGGC1588240.46656194893311087No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCT1585200.46566891744872774No Hit
TCGTTGGGCCCCCGGTTCGATTCCGGGCTTGCGC1561520.45871267220195394No Hit
TTGATGTTGACGCAATGTGATTTCTGCCCA1541220.45274933696084285No Hit
TTCCAACGGGGCCTTTCCTTCTGGC1502640.4414160623991649No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA1404990.412730363566924No Hit
TTCCGATATAGTGTAACGGCTATCACATCACGC1211920.35601405149789433No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAGC1143430.3358944046671706No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGCG1131940.3325190981686304No Hit
AGAGATGTATTTATTAGATAAAAAATCA1118460.3285592085602473No Hit
TACGCGAAACTCAGGTGCTGCAATCT1107000.3251927148724083No Hit
TTTCCAACGGGGCCTTTCCTTCTGGC1098680.32274862870462284No Hit
ATGTACACGGAGTCGACCCGCAACGC1037670.3048263093420523No Hit
TGGTCCTATAGTGTAGTGGTTATCACTTTCGGT1030310.3026642331167037No Hit
AGAGATGTATTTATTAGATAAAAAATCAATG974720.2863340948874741No Hit
TTTGTGCCCTCTGCTCCTTGTGGGTAGGGGA970990.2852383687569645No Hit
TTTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA948120.2785200693991217No Hit
ACGTGGGTTAGTCGATCCTAAGAGATGGG944650.2775007209613554No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGC906520.2662996385601947No Hit
TTTGGAAGAGATGTATTTATTAGATAAAAAATCA892910.26230156010544003No Hit
GCGTAGTCGGTAGCGCTCTCCCT892770.2622604336555013No Hit
TTGCGAGAGGCCCTGGGTTCATTTCCCAGCTCGCCC881850.25905257056028297No Hit
TTCCGTGATAGTTTAATGGTCAGAATGGGCG856600.25163512155348233No Hit
ATCGAAGGGTTGCAGGTTCATTTCCTGTCCGTT840620.24694083105333678No Hit
TCGTGGAGACCGGGGTTCGACTCCCCGTATCGGA801230.2353696106027278No Hit
TTCCGATATAGTGTAACGGCTATCACATCACG794380.23335735215929873No Hit
TTTTGTGCCCTCTGCTCCTTGTGGGTAGGGGA792540.23281683310296158No Hit
TTGCGAGAGGCCCTGGGTTCATTTCCCAGCTCGCC789650.23196786567208416No Hit
TCGTTGGGCCCCCGGTTCGATTCCGGGCTTGCGCA775580.22783465745324516No Hit
AGGTGGGGACACGGGTTCGATTCTCGTACCGC774810.22760846197858237No Hit
ATGTACACGGAGTCGACCCGCAACGCG724610.21286169207199254No Hit
AGGTGGGGACACGGGTTCGATTCTCGTACCGCT723580.21255911890458645No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACC721360.2119069709127014No Hit
AAGAGGTGCACAATCGACCGATCCTGA720010.21151039443114966No Hit
ACACGGAGTCGACCCGCAACGCGA713900.20971551865168225No Hit
TTGGAAGAGATGTATTTATTAGATAAAAAATCA688770.20233332088768624No Hit
ATGTACACGGAGTCGACCCGCAACGCGC669260.19660205632837216No Hit
ACGTTCTAGCATTCAAGGTCCCA660310.1939729011358626No Hit
TTCCAACGGGGCCTTTCCTTCTGGCT655180.1924659105059661No Hit
TCGATGAAACCCTGGTTCGATTCTAGGAGATGG649930.19092366863326496No Hit
ACGGAGTCGACCCGCAACGCGA647330.190159891705832No Hit
TCGTGGAGACCGGGGTTCGACTCCCCGTATCGGAG611660.17968145978216554No Hit
TACACGGAGTCGACCCGCAACGCGA594760.17471690975385143No Hit
ATCGAAGGGTTGCAGGTTCATTTCCTGTCCGT576520.16935872084755269No Hit
ATGTACACGGAGTCGACCCGCAAC570440.16757265787878642No Hit
CGTGGAGACCGGGGTTCGACTCCCCGTATCGGA564070.16570140440657574No Hit
GTCTAGTCGGTTATGGCATCTGCT545360.16020514813262562No Hit
TTTCCAACGGGGCCTTTCCTTCTGGCT544160.15985263570457967No Hit
TTGTGCCCTCTGCTCCTTGTGGGTAGGGGA537140.15779043800051074No Hit
TCCGATGTAGTGTAACGGCTATCACATCACGT534220.1569326577589322No Hit
AAAAAAAAAAAAAAA531780.15621588248857207No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCGCC527040.15482345839779046No Hit
TCCTTGTTAGCTCAGTTGGTAGAGCTTTCGG518630.15235293379790163No Hit
TTGCCTTGTTGTAGACGGCCTTGG512070.15042586585791698No Hit
TTGGAAGAGATGTATTTATTAGATA502790.1476997697476948No Hit
ATCGGGCGTTCGACTCGCCCCCGGGAGA487660.14325517555074854No Hit
TTGCCTTGTTGTAGACGGCCTTGGT485390.14258833954102823No Hit
TCCAGGGGGCATGCCTGTTTGAGC484340.142279891166488No Hit
TTTTTCCACGTTCTAGCATTCAAGGTCCC474100.13927178511382907No Hit
TATACGCGAAACTCAGGTGCTGCAATCT473960.13923065866389034No Hit
AAGCGGTGGCTCAATGGTAGAGCTTTCGACT470230.1381349325333808No Hit
ATGTATTTATTAGATAAAAAATCAATG469160.13782060895170647No Hit
TCGTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA460680.13532952112684826No Hit
TCGTTGGGCCCCCGGTTCGATTCCGGGCTTGCG459260.13491238142032722No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC454060.13338482756546133No Hit
TTTGGAAGAGATGTATTTATTAGATA453720.13328494904418164No Hit
TAGAGATGTATTTATTAGATAAAAAATCA448640.13179264643212038No Hit
TCCAACGGGGCCTTTCCTTCTGG436850.1283292118265687No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTGTCG435200.1278445072380055No Hit
ACGTGGGTTAGTCGATCCTAAGAGATGGGG429810.12626113891536567No Hit
TTACGCGAAACTCAGGTGCTGCAATCT425530.12500384458866837No Hit
ATCGGGCGTTCGGCTCGCCCCCGGGAGA425020.12485402680674884No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTTGAGT424310.12464545695348832No Hit
TTGGGGACACGGGTTCGATTCTCGTACCGC419920.12335584898755347No Hit
TAGAGATGTATTTATTAGATAAAAAATCAATG416890.12246575510673739No Hit
GTCTAGTGGTATGATTCTCGCT413770.12154922279381786No Hit
TTTGCCAGATCGGGGTTCAATTCCCCGTCGCGGAG405040.11898469487978341No Hit
TGGTCCTATAGTGTAGTGGTTATCACTTTCGG399140.11725150877522407No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCTTG395360.11614109462687926No Hit
TTGCGAGAGGCCCTGGGTTCATTTCCCAGCTCGCCCC385950.11337680967028543No Hit
CTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA385870.11335330884174903No Hit
TAGCGTGTTACCTATACTCTACCGTCAGGGT384980.11309186212428161No Hit
TGGGCGGTTAGTGTAGTGGTTATCATCCCACC360210.10581541808869935No Hit
ATTTATTAGATAAAAAATCA346050.1016557714377569No Hit
ATAGTGTAGTGGTTATCACTTTCGGT341620.10035441305755385No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)