FastQCFastQC Report
Sun 1 Oct 2023
SRR7471276_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7471276_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51180261
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length20-45
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTACACGGAGTCGACCCGCAACGCGA47086739.200173871719802No Hit
ACGCGAAACTCAGGTGCTGCAATCT14934452.9180097381683927No Hit
GCCAGATCGGGGTTCAATTCCCCGTCGCGGA11841802.3137435739141696No Hit
ATGTATTTATTAGATAAAAAATCA8799941.7194011574110575No Hit
ACGTTCTAGCATTCAAGGTCCC8362071.6338466894492782No Hit
ACGTTCTAGCATTCAAGGTCCCA7662971.4972510593488375No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGGA7630391.490885323933772No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCC6964221.3607238149879697No Hit
AAGAGGTGCACAATCGACCGATCCTGA6496391.269315527718782No Hit
TCCAACGGGGCCTTTCCTTCTGGC5499861.0746056961296073No Hit
GTCTAGTCGGTTATGGCATCTG5486021.0719015285990823No Hit
TTTTCCACGTTCTAGCATTCAAGGTCCCA5190141.014090178242741No Hit
TTGGGGACACGGGTTCGATTCTCGTACCGC4630040.9046534561439614No Hit
ATGTATTTATTAGATAAAAAATCAATG4524340.8840009627930581No Hit
AGATCGGGGTTCAATTCCCCGTCGCGGA4253370.831056723216007No Hit
GTCTAGTCGGTTATGGCATCTGC4146020.8100818399499761No Hit
ATCGGGCGTTCGACTCGCCCCCGGGAGA3967440.7751894817417989No Hit
TCCGTGATAGTTTAATGGTCAGAATGGGC3526210.6889785106801234No Hit
CCAGATCGGGGTTCAATTCCCCGTCGCGGA2868020.5603761965965747No Hit
TTTTCCACGTTCTAGCATTCAAGGTCC2667740.5212439225349007No Hit
TTGCCAGATCGGGGTTCAATTCCCCGTCGCGG2651780.5181255328103934No Hit
TCGTATGGCGCAGTGGTAGCGCAGCAGA2509840.4903921845963232No Hit
ACGTTCTAGCATTCAAGGTCC2499090.48829176545230984No Hit
ACGGAGTCGACCCGCAACGCGA2397080.4683602531843282No Hit
TTGGGTACAAATGGCAGTCTGACAAGT2133760.41691073048650534No Hit
TTGGGGACACGGGTTCGATTCTCGTACCG1918320.37481637696220427No Hit
TCGTGGTCTAGTCGGTTATGGCATCTG1758830.3436539723781401No Hit
ACACGGAGTCGACCCGCAACGCGA1740270.3400275743025226No Hit
ATCTGGTTGATCCTGCCAGTAGTC1720130.336092463459692No Hit
TGGGGACACGGGTTCGATTCTCGTACCGC1709210.33395882838502916No Hit
GTCTAGTCGGTTATGGCATCTGCT1626940.3178842718289381No Hit
TTTCCACGTTCTAGCATTCAAGGTCCC1519730.2969367428587361No Hit
TCCTATAGTGTAGTGGTTATCACTTTCGG1371440.2679626819409928No Hit
TTTCCACGTTCTAGCATTCAAGGTCCCA1325790.25904322762246174No Hit
AGGTTAGGGGTTCGAGCCCCCTACAGGGC1295220.2530702217403698No Hit
TTGGGGACACGGGTTCGATTCTCGTACCGCT1259230.24603821383404043No Hit
TCGTGGTCTAGTCGGTTATGGCATCTGC1228240.23998314506446147No Hit
TCGTTGGGCCCCCGGTTCGATTCCGGGCT1210020.23642317885014305No Hit
ATGCCGACTAGGGATCGGGTGGTGTT1200600.23458262551650527No Hit
TCCAGATCGGGGTTCAATTCCCCGTCGCGGA1190630.232634608877825No Hit
AAGAGGTGCACAATCGACCGATCCTG1175460.2296705755369243No Hit
TGCCAGATCGGGGTTCAATTCCCCGTCGCGGA1161470.22693709983229665No Hit
TACGCGAAACTCAGGTGCTGCAATCT1137340.22222239155833928No Hit
TTGCCCGCGCTGGTTCAAATCCTGCTGGTG1100800.21508292034696738No Hit
TTGCCTAGTCTCTATACAGCGTGTT1092170.21339672339693616No Hit
TCGGGGCTGATCCGGGTTGAAGAC1089450.21286526850654397No Hit
AAGAGGTGCACAATCGACCGATCCT1088380.21265620353127937No Hit
TCCGATATAGTGTAACGGCTATCACATC1071350.2093287488315075No Hit
TCCGTGATAGTTTAATGGTCAGAATGGG1035640.20235144951683617No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTT1030250.20129830912741925No Hit
ATGTATTTATTAGATAAAAAATC970070.18953986967749148No Hit
ATTGGTGTTAGGGGAGCTGGGGCCT968200.18917449444034684No Hit
AAGTGGTTCAGTGGTTAGAATTCATGC948660.18535661629392627No Hit
TCCAACGGGGCCTTTCCTTCTGGCTAACCT941630.1839830398676552No Hit
TCACGTTCTAGCATTCAAGGTCCCA897980.17545436120382427No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGTTG870330.17005188777759458No Hit
TTTTCCACGTTCTAGCATTCAAGGTC859370.1679104371898377No Hit
AAGGCGTCCTTGTGGCGTCGCTGAACC826980.16158182546196861No Hit
AGCATGGGGCCCGGGTTCGATTCCCGGCT802660.1568299935008147No Hit
TCCAACGGGGCCTTTCCTTCTGGCT748400.14622824998879938No Hit
TATCTGGTTGATCCTGCCAGTAGTC747050.1459644764218768No Hit
TCCGTGATAGTTTAATGGTCAGAATG740180.14462216204798173No Hit
TCGGGGATCAGCGGTTCGATCCCGCTAGAGA740160.14461825429143474No Hit
TGGAGACCGGGGTTCGACTCCCCGTATCGGA720980.14087071576286023No Hit
TTGGAAGAGATGTATTTATTAGATA707220.13818217925852314No Hit
TTGCCCGCGCAGGTTCGAGTCCTGCAGT703120.1373810891663878No Hit
AAGCCTTTGTTGTCTGATTTGT700630.1368945734762861No Hit
AAGGTTAGGGGTTCGAGCCCCCTACAGGGC695060.13580626327794615No Hit
TCCACGTTCTAGCATTCAAGGTCCCA682190.13329162193995064No Hit
TCCACGTTCTAGCATTCAAGGTCCC678570.13258431800494333No Hit
TTGCGGGAGGTCCCGGGTTCGAGTCCCGGC666270.1301810477285374No Hit
TTGCGGGAGGTCCCGGGTTCGAGTCCCGGCT666060.13014001628479385No Hit
TCCAATAGTGTAGCGGCTATCACGTTGC658380.12863943777074524No Hit
TCAAGAGGTGCACAATCGACCGATCCTGA645420.12610721152828822No Hit
ACGTTCTAGCATTCAAGGTC632790.12363946326885672No Hit
GCCCAGTTGGTTAAGGCACCG626420.12239484280863672No Hit
ACTATGCCGACTAGGGATCGGGTGGTG619550.12105252843474168No Hit
TGATGTATTTATTAGATAAAAAATCA610560.11929599186686446No Hit
CCAACGGGGCCTTTCCTTCTGGCTAACCT610290.11924323715347993No Hit
AGATCGGGGTTCAATTCCCCGTCGCGGAG592460.11575947219182803No Hit
TGGGCCCCCGGTTCGATTCCGGGCTTGCGC581290.11357699016032761No Hit
TACACGGAGTCGACCCGCAACGCGA576960.1127309608679018No Hit
ATCGGGCGTTCGGCTCGCCCCCGGGAGA576130.11256878897120122No Hit
ATGTACACGGAGTCGACCCGCAACGC564900.11037458367005983No Hit
CAGATCGGGGTTCAATTCCCCGTCGCGGA557810.10898928397414775No Hit
TTTCCACGTTCTAGCATTCAAGGTCC545600.10660359860220331No Hit
TCCGCGCGAGTTCGAACCTCGCATCCT532690.10408114175111377No Hit
TGCGAGAGGCCCTGGGTTCATTTCCCAGCTCGCC519860.10157431592621226No Hit
GGAGACCGGGGTTCGACTCCCCGTATCGGA512560.10014798478655668No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)