FastQCFastQC Report
Mon 10 Jul 2023
SRR7516856_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7516856_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52805699
Total Bases2.6 Gbp
Sequences flagged as poor quality0
Sequence length35-55
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN4199530.7952796913075613No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1443950.273445864242797No Hit
GCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1350180.25568831121807517No Hit
GGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1154620.2186544297046423No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA916060.17347748772343682No Hit
GCGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA758120.14356783725180874No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA754260.1428368555447017No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA752410.14248651457108824No Hit
GCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA687690.1302302616995942No Hit
GCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA682290.12920764480364136No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAA667590.12642385436465864No Hit
GGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA621390.11767479869928432No Hit
GGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA608390.1152129432090275No Hit
GGCCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAA589220.11158265322839492No Hit
GGGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA537370.10176363729225515No Hit
GCGGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA537330.10175606235228513No Hit
CCGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA530330.10043044785753143No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)