FastQCFastQC Report
Fri 7 Jul 2023
SRR7516865_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7516865_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35768270
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length35-55
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN5493501.5358584577895436No Hit
CGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1656460.4631087832875339No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1359690.3801385977012587No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1265550.35381918107864874No Hit
CGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1127240.31515083061048244No Hit
GCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA1009530.28224177462315064No Hit
CGGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA675510.18885733081303624No Hit
CGGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA670600.18748460576930337No Hit
GGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA643480.17990246662754447No Hit
CGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAA612320.17119083478177724No Hit
CCGGGGTACACGGAGTCAAGACCCGCAACGCAAAAAAAAAAAAAA567710.15871888687934865No Hit
CCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA552280.15440500756676237No Hit
CCGGGGGCTCTCGCTTCTGGCGCCAAGCGTCCGTCCAAAAAAAAAAAAAA522340.14603446015141353No Hit
CCCCCCTGTGGTCTAGTGGTTAGGATTCGGCGAAAAAAAAAAAAAA478720.13383929387694737No Hit
CCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAA463440.12956735117465842No Hit
GGGGGGTACACGGAGTCAAGACCCGCAACGCAAAAAAAAAAAAAA460180.12865592884419627No Hit
CCGATCGACACTTCGAACGCACTTGCGGCCCCGGGTAAAAAAAAAAAAAA439990.12301126109817444No Hit
GCGGGGTACACGGAGTCAAGACCCGCAACGCAAAAAAAAAAAAAA429130.1199750505126471No Hit
CGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAACATCGGAA412370.11528933325542443No Hit
CGGGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA409560.11450372075585429No Hit
GCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA399820.11178063686054707No Hit
CGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAA393750.11008360203051476No Hit
CCGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA381330.1066112506978951No Hit
CGGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAA377650.10558240585860038No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)