FastQCFastQC Report
Fri 7 Jul 2023
SRR7516867_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7516867_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28540498
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length35-55
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA1146460.40169586389137285No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN521220.18262470402583725No Hit
GGCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA453060.15874285024739232No Hit
GCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA450380.15780383369624454No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG428370.15009198508028837No Hit
GGCCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA408170.14301432301566708No Hit
CCGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAA385670.13513078853774732No Hit
GGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA344370.12066012302938793No Hit
GGGCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAA332060.11634695372169049No Hit
GGGGGGGGTGGGGGCCGGGCCGCCCCTCCCACGGCGCAAAAAAAAAAAAA327000.11457403441243387No Hit
GGCCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAA322070.11284666441349411No Hit
GCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAA297500.10423784476360574No Hit
GGGCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAA286310.10031710028325365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)