FastQCFastQC Report
Fri 7 Jul 2023
SRR7777908.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7777908.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10448256
Total Bases277.1 Mbp
Sequences flagged as poor quality0
Sequence length12-45
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCGCGGCCCGGGTTCGATTCCCGGTC503570.48196560268048566No Hit
GTCTAGGGGTATGATTCTCGCTT483130.46240252918764624No Hit
ACCCTGAACGCGCCCGATCTCGTC367760.3519821872664682No Hit
GTCTAGCGGTTAGGATTCCTGG352660.33753001457850956No Hit
GCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGC350790.3357402421992723No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT337520.32303955798939077No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGG326600.31258805297266834No Hit
GTATAGTGGTGAGTATCCCCGCCTGTC311470.29810716735883963No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTATGGG263180.25188892768324206No Hit
AGGCGGCCCGGGTTCGACTCCCGGT261690.2504628523650263No Hit
ACGCGGGAGACCGGGGTTCGATTCCCCGACGGGGAGC245700.2351588628762542No Hit
ACGCGGGAGACCGGGGTTCGATTCCCCGACGGG233140.2231377179119654No Hit
ACCACCCTGAACGCGCCCGATCTCGTC208660.19970797040195035No Hit
GTCTAGGGGTATGATTCTCGCTTC198750.19022313388952183No Hit
GTATAGTGGTGAGTATCCCCGCCTGT183200.17534026731351146No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGCG179430.17173200962916682No Hit
ACTTGGATGGGAGACCGCCTGGGAAT173840.1663818344420351No Hit
TGATCTCGGAAGCTAAGCAGGGTC153710.14711546118318694No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT152790.14623493145650338No Hit
CGACTGCATAATTTGTGGTAGTGGGGG148970.14257881889570853No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT148960.1425692479204185No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTATGGGAAC144180.13799432173177992No Hit
AGGCGGCCCGGGTTCGACTCCCGGTATGGG141250.13519002597179855No Hit
TCGACTGCATAATTTGTGGTAGTGGGG138710.13275899824812867No Hit
ACCCTGAACGCGCCCGATCTCGT137440.13154348438629376No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGT130970.12535106337363863No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGC130770.12515964386783784No Hit
GTCTAGTGGTTAGGATTCGGCGCT120930.11574180418243962No Hit
ACCACCCTGAACGCGCCCGATCTCGT118700.11360747669276097No Hit
CTCGACTGCATAATTTGTGGTAGTGGGG113250.10839129515968982No Hit
ATACCACCCTGAACGCGCCCGATCTCGTC107540.10292626826907762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)