FastQCFastQC Report
Fri 7 Jul 2023
SRR7777912.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7777912.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27629469
Total Bases752 Mbp
Sequences flagged as poor quality0
Sequence length12-45
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAGCGGTTAGGATTCCTGG2555900.9250630187644939No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGG1718960.6221473166929122No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTATGGG1129310.4087338775855591No Hit
TCGACTGCATAATTTGTGGTAGTGGGG1095750.396587426273013No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGCG807690.29232917939899605No Hit
CGACTGCATAATTTGTGGTAGTGGGG768200.2780364689600079No Hit
CGACTGCATAATTTGTGGTAGTGGGGG730660.2644495266991921No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGG639200.23134718948091257No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG550440.19922206974010248No Hit
GCCGCGGCCCGGGTTCGATTCCCGGTCAGGG529070.19148757437213143No Hit
CTCGACTGCATAATTTGTGGTAGTGGGG507800.18378927224406666No Hit
GTCTAGTGGTTAGGATTCGGCG492940.17841095679399413No Hit
GACTGCATAATTTGTGGTAGTGGGGG397480.1438608899794636No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTC362810.1313126937039579No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGC342850.12408852301866533No Hit
CCGCGGCCCGGGTTCGATTCCCGGTCAGGG340040.12307149297729898No Hit
GTCTAGGGGTATGATTCTCGCTT334480.12105914883851006No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG320310.11593056674379083No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGG313220.11336446603443591No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)