FastQCFastQC Report
Fri 7 Jul 2023
SRR7777914.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7777914.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26557541
Total Bases707.9 Mbp
Sequences flagged as poor quality0
Sequence length12-45
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAGCGGTTAGGATTCCTGG2272070.8555272493036913No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTCAGGG1316470.49570477929413725No Hit
CCAGGCGGCCCGGGTTCGACTCCCGGTATGGG1009920.38027617090000915No Hit
TCGACTGCATAATTTGTGGTAGTGGGG940350.3540802215084597No Hit
CGACTGCATAATTTGTGGTAGTGGGGG663140.2496993226895517No Hit
CGACTGCATAATTTGTGGTAGTGGGG527890.19877216795033845No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGG508190.1913543125095806No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGCG501470.18882395776024594No Hit
GTCTAGTGGTTAGGATTCGGCG434760.163704915300705No Hit
CTCGACTGCATAATTTGTGGTAGTGGGG420310.15826389950786482No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG394110.1483985283125422No Hit
CGCCGCGGCCCGGGTTCGATTCCCGGTC308150.1160310738106363No Hit
CCCTGGTGGTCTAGTGGTTAGGATTCGGC301900.11367769327740095No Hit
GACTGCATAATTTGTGGTAGTGGGGG269070.10131585601242223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)