FastQCFastQC Report
Fri 7 Jul 2023
SRR7883752_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7883752_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000000
Total Bases32.9 Mbp
Sequences flagged as poor quality0
Sequence length20-60
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCCTCCTCCCCGCGCCCCCGCCCCG43430.43429999999999996No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG40650.40650000000000003No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG39250.39249999999999996No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCC38760.3876No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC29260.2926No Hit
AATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT24700.247No Hit
TGCGCGGGTCGGGGGGCGGGGCGGACTGT21920.2192No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG18290.18289999999999998No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG17510.1751No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC17270.1727No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCCGG16420.1642No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG16300.163No Hit
GGGGGGTCTCCCCCGCGGGGGCGCGCCGGC14640.1464No Hit
GCGCGGGTCGGGGGGCGGGGCGGACTGT14370.1437No Hit
CCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG13890.1389No Hit
CGCGCGGGTCGGGGGGCGGGGCGGACTGT13850.13849999999999998No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT13480.1348No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG13310.1331No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC12660.1266No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC12380.1238No Hit
AAATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT12150.1215No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT11900.11900000000000001No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC11470.1147No Hit
CCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG11240.1124No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCC10710.10709999999999999No Hit

[OK]Adapter Content

Adapter graph