FastQCFastQC Report
Fri 7 Jul 2023
SRR7883753_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7883753_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000000
Total Bases34.2 Mbp
Sequences flagged as poor quality0
Sequence length20-60
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCCTCCTCCCCGCGCCCCCGCCCCG29340.2934No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG26180.26180000000000003No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCC25450.2545No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG21980.2198No Hit
AATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT21710.21710000000000002No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC19120.1912No Hit
TGCGCGGGTCGGGGGGCGGGGCGGACTGT16430.1643No Hit
GGGGGGTCTCCCCCGCGGGGGCGCGCCGGC15630.1563No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCCGG15530.1553No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG14870.1487No Hit
CGCGCGGGTCGGGGGGCGGGGCGGACTGT13980.13979999999999998No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG13850.13849999999999998No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCGTT13060.13060000000000002No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC12940.12940000000000002No Hit
AAATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT12750.1275No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC12410.12409999999999999No Hit
CCCCCCGGGGAGCCCGGCGGGCGCCGGCGCGCC12320.1232No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCC11740.11739999999999999No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT11710.1171No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC11670.11670000000000001No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC10810.10809999999999999No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC10570.1057No Hit
GCGCGGGTCGGGGGGCGGGGCGGACTGT10320.10319999999999999No Hit

[OK]Adapter Content

Adapter graph