FastQCFastQC Report
Fri 7 Jul 2023
SRR7883755_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR7883755_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1000000
Total Bases34 Mbp
Sequences flagged as poor quality0
Sequence length20-60
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG41730.41729999999999995No Hit
GCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG36180.3618No Hit
TCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG34150.3415No Hit
CCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG28820.2882No Hit
CCCCCCGGGGAGCCCGGCGGGCGCCGGCGCGCC24220.2422No Hit
CCGTGATCGTATAGTGGTTAGTACTCTGCGT22830.22829999999999998No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGAC21870.2187No Hit
CGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG20580.20579999999999998No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCC18800.188No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC18660.18660000000000002No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCCG17330.17329999999999998No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG17060.1706No Hit
AGCAGAGTGGCGCAGCGGAAGCGTGCTGGGC16680.1668No Hit
TGCGCGGGTCGGGGGGCGGGGCGGACTGT16080.1608No Hit
GTCAGGATGGCCGAGTGGTCTAAGGCTCCAGAC14650.1465No Hit
AATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT14170.14170000000000002No Hit
GCGGGAGGCCCGGGTTCGTTTCCCGGCCCATGC13480.1348No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCC13180.1318No Hit
AAATAAGTGGGAGGCCCCCGGCGCCCCCCCGGT12670.12669999999999998No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCC12380.1238No Hit
TCCAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC11920.11919999999999999No Hit
TTTTCCGTAGTGTAGTGGTTATCACGTTCGCC11870.11869999999999999No Hit
TGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAG11760.1176No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCGC11610.1161No Hit
AGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC11400.11399999999999999No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG11370.1137No Hit
CTCTCGCTTCTGGCGCCAAGCGCCCGGCCG10860.10859999999999999No Hit
GCCCGGATAGCTCAGTCGGTAGAGCATCAGAC10650.1065No Hit
ACCCCTCCTCCCCGCGCCCCCGCCCCGG10580.10579999999999999No Hit
AACACAAAGCACCCAACTTACACTTAGGAGATT10070.10070000000000001No Hit
AGAGTGGCGCAGCGGAAGCGTGCTGGGC10020.10020000000000001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)