FastQCFastQC Report
Mon 17 Jul 2023
SRR8130805_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8130805_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53195784
Total Bases8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA2738760.5148453118014015No Hit
GCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2467950.4639371420862977No Hit
CCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2345740.4409635169584116No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2252430.4234226531937193No Hit
GCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA2211020.41563820170410504No Hit
GGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1934530.36366227819858804No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1872420.3519865408882779No Hit
CCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1826110.34328096376961004No Hit
CGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1799650.3383068853727205No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1768660.33248123573101207No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1621080.30473843566249537No Hit
GGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1578110.29666072785016195No Hit
CCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1544650.2903707556974816No Hit
CCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1424550.2677937785445553No Hit
CCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1278310.24030287813786144No Hit
GCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1242280.2335297849919836No Hit
CCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1178440.2215288339391708No Hit
GGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1085500.20405752455871315No Hit
GCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA989980.1861012143368354No Hit
CGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC950990.17877168611708025No Hit
CGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA915400.17208130629299495No Hit
CGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA895380.16831785015143305No Hit
GCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA843650.1585933952961385No Hit
GGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC825820.1552416259153169No Hit
CGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA809220.15212107786586995No Hit
CGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA768160.14440242106404522No Hit
GCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA724540.13620252311724554No Hit
GGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA708570.1332004055058198No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGA702270.13201610112560802No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG664680.124949751657011No Hit
GGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA652740.12270521287927628No Hit
GGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA641510.12059414332534324No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG640730.12044751516398368No Hit
GCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA615900.11577985202737119No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGAT615340.11567458052690793No Hit
CCGTCCTCCCGACCCCTCCACCCGCGCGTCAAAAAAAAAAAAAAAGATCG605480.11382105017946535No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA589060.11073433939802448No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG566610.10651408013838089No Hit
GCCTCCTCCCGACCCCTCCACCCGCGCGTCAAAAAAAAAAAAAAAGATCG562060.10565874919711683No Hit
CGCCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATC555480.10442180906667341No Hit
CGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG551980.10376386218877798No Hit
CCGTCACCGCCCGTCCCCGCCCCTTGCCAAAAAAAAAAAAAAAGATCGGA538410.10121290815076622No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)