FastQCFastQC Report
Tue 11 Jul 2023
SRR8130806_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8130806_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56971904
Total Bases8.6 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA5789061.0161254221027964No Hit
GCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA4649730.8161443928572231No Hit
GGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA4121900.7234969714194562No Hit
CCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA3730660.6548245254362571No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA3323460.5833506986180417No Hit
CCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA3207520.5630003167877276No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2761040.4846318634532558No Hit
GCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2750600.48279938125290667No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2527580.4436537701109656No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2399830.4212304366727852No Hit
CCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2254370.3956985534483804No Hit
CCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA2247270.39445232513205103No Hit
CGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1926110.33808067920636814No Hit
CGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1801830.3162664179171544No Hit
GGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1776000.31173260419732507No Hit
GCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1739900.3053961475466925No Hit
CCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1723990.3026035429674248No Hit
GGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1707420.29969509181227294No Hit
CGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1646710.28903896208208174No Hit
CGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1457090.25575588978033803No Hit
GCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1411930.24782917558802317No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGA1405080.24662682855043777No Hit
CCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1393960.24467498927190495No Hit
GGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1383880.24290569611294718No Hit
GGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1319150.23154395542055256No Hit
GCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1277440.22422280287490481No Hit
GCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1206060.21169382016791993No Hit
CGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1189480.20878361376161836No Hit
CGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1168710.20513795712356744No Hit
GCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1160810.20375130871525723No Hit
GGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1042490.18298317711130033No Hit
GCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1035210.18170535427427525No Hit
CCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1033390.181385898565019No Hit
CGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC910000.15972785462813388No Hit
GCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGA891290.15644377972693346No Hit
CCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA875660.15370032217985904No Hit
GGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG838830.147235732195294No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA838220.14712866187515866No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGAT825320.14486438789196865No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG820340.1439902728193883No Hit
GGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC791170.13887020521553922No Hit
CGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAA786120.1379838033849106No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG750570.1317438855475148No Hit
CGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA725020.12725921885987873No Hit
GCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA720980.12655009739537582No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA707020.12409976679031123No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG700640.12297991655676455No Hit
CCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA672530.11804590557478999No Hit
CGCCCCGGGGGGGGATGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATC638020.11198853385696922No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA637640.11192183431327835No Hit
CCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAA635110.11147775577238914No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAG620080.1088396132943003No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA614740.1079023091803286No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG597400.10485870368664527No Hit
CGCCCCGGGGGGGGATGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGG588780.10334567719555239No Hit
GCCTCCTCCCGACCCCTCCACCCGCGCGTCAAAAAAAAAAAAAAAGATCG575350.10098837490142511No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)