FastQCFastQC Report
Tue 11 Jul 2023
SRR8130807_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8130807_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65434674
Total Bases9.8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA6712101.0257711377915628No Hit
GCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA5385850.8230880771255925No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA5144850.786257451210042No Hit
GGCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA4726400.722308175631776No Hit
CCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA4377490.6689862931081463No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA4330910.6618677430867922No Hit
CCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA3938000.6018215969105309No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA3934440.6012775428513635No Hit
CCCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA3757010.5741619496721264No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA3678500.5621637237773967No Hit
CGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA3216100.49149782575519513No Hit
GGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA3096550.47322769576264717No Hit
CCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2685480.41040626258793617No Hit
GCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2650970.405132300345838No Hit
CGGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA2543780.38875107714298385No Hit
CCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC2346910.358664582022675No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGA2341470.35783321851653144No Hit
GGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA2323350.3550640444850386No Hit
GCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA2245190.34311930705118204No Hit
GCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA2154430.3292489850258901No Hit
CGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG2033740.31080463547506937No Hit
GCGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA2023680.3092672242853995No Hit
GCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA2023110.30918011450626315No Hit
CGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1914140.29252686427382524No Hit
CGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1888210.28856413344399023No Hit
CGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1815090.2773896298467079No Hit
CCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1731970.26468688451019107No Hit
GCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1702090.2601204981933585No Hit
GGCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1645750.2515103842345115No Hit
GGGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAA1626740.24860519668822678No Hit
GGGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAA1584150.24209641512082722No Hit
CCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAA1547210.23645109013609514No Hit
GCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAGA1469590.2245888777561572No Hit
GGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAAG1422210.21734806839566437No Hit
CCCTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1345900.2056860556835662No Hit
GCGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC1240430.1895676900598603No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA1201540.1836243579359775No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG1119280.1710530413890348No Hit
CCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGAT1035520.15825248858120697No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA1019450.15579660410625717No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG1017540.1555047099340634No Hit
CGCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAA997660.15246656535646527No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG953610.14573466049513747No Hit
CGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC940690.14376017216804654No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA928750.1419354515314006No Hit
GCCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAG917890.140275781002592No Hit
CGCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA908320.13881325365814462No Hit
GCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA878650.13427896041783596No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGCAAAAAAAAAAAAAAA871550.1331939087829795No Hit
CCCCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAA836380.1278190825860919No Hit
CCCCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAGA835090.12762193940173064No Hit
GGGTCCTCCCGACCCCTCCACCCGCGCGTCGAAAAAAAAAAAAAAAGATC816700.12481150284327847No Hit
CCGCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAA808290.12352625154058228No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGAAAAAAAAAAAAAAAG804800.12299289517358947No Hit
CGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAG777520.11882385170895784No Hit
CCGTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAG709850.10848223985955825No Hit
CCGAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACAAAAAAAAAAAAAAG707920.10818728920388601No Hit
GGCTCCCCCGCCGGGTCCGCCCCCCGGGCCGCGGTAAAAAAAAAAAAAAG665640.10172588313040269No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)