FastQCFastQC Report
Tue 22 Aug 2023
SRR8135935_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8135935_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49956134
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length35-75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATC869790.17411075084393038No Hit
CCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCA552000.11049694117643291No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)