FastQCFastQC Report
Tue 22 Aug 2023
SRR8135937_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8135937_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47632455
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length35-75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATC877750.1842756162788586No Hit
CCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCA594460.12480146152450047No Hit
CCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATCGA523540.1099124535991269No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)