FastQCFastQC Report
Tue 22 Aug 2023
SRR8135939_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8135939_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18521477
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length35-101
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCCCTTCGCAGTAACACCAAGTACAGGAATATTAACCTGTTTCCCATC222700.1202387908912448No Hit
CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT197560.10666535935552007No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)