FastQCFastQC Report
Mon 10 Jul 2023
SRR8197274_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8197274_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23155532
Total Bases601.4 Mbp
Sequences flagged as poor quality0
Sequence length12-37
%GC71

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC10920944.716341650021256No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG7325353.1635420857529857No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC5814702.5111493875416033No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG3117631.346386686343462No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2141610.9248804993985886No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG1993010.8607057700077891No Hit
CCGGCCGAGGTGGGATCCCGAGGCC1982650.856231677164662No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1784170.7705156590658336No Hit
CGGCCGAGGTGGGATCCCGAGGCC1761140.7605698715969903No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1722840.7440295476692136No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1684360.7274114885375987No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1607390.6941710516519335No Hit
CCGGCCGAGGTGGGATCCCGAGGCCT1580210.6824330358723781No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCC1542960.6663461673003237No Hit
CCCCCGCGGGGGCGCGCCGGC1457280.6293442102733809No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1306780.5643489426198457No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1183970.5113119404900738No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1179060.5091914968742675No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCCT1164100.502730837710833No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCG1120680.4839793790961054No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCC1112200.4803171872708431No Hit
GGTGGGGGGGCCGGGCCACCCCTCCCACGGCG1059460.45754077254627534No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG1003750.4334817269583787No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG968420.4182240338939308No Hit
GCCGGCCGAGGTGGGATCCCGAGGCC967810.4179605979253684No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG951630.4109730668248089No Hit
CGCTTCTGGCGCCAAGCGCCCGGCCG947210.4090642357083396No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC874130.3775037429500648No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT873570.37726190009367955No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCC871050.376173607239946No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC870950.37613042101559147No Hit
CGGCCGAGGTGGGATCCCGAGGCCT853050.3684000868561344No Hit
GCGCAGCGGAAGCGTGCTGGGC846630.36562753125257497No Hit
GGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC842510.3638482588091692No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC840660.3630493136586108No Hit
CCCCCCGCGGGGGCGCGCCGGC839180.3624101575381641No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCC771910.33335878441488626No Hit
AACGATGCCGACCGGCGATGCGGCGGCG763790.3298520629973002No Hit
TCGGCCGAGGTGGGATCCCGAGGCC751470.32453152015682474No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGG726410.3137090523335849No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCT716500.3094292975000531No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGC705220.30455789139286454No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGC673010.29064760852827737No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC657210.2838241850802651No Hit
CCCGCCGAGGGCGCACCACCGGCCCGTCTCGC649980.2807018210594341No Hit
CGCTTCTGGCGCCAAGCGCCCGG645850.2789182299935929No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT582450.25153816375283455No Hit
TTGGGGGGGCCGGGCCACCCCTCCCACGGCG564170.24364372194083037No Hit
TTTTGGTGACTCT562170.2427799974537402No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG545820.2357190497717781No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT531440.22950887070959974No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG530670.22917633678207006No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG529650.22873583729365407No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT529310.22858900413084876No Hit
CGCTTCTGGCGCCAAGCGCCCGGC512700.2214157722655649No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC505160.21815953094923493No Hit
CGCTTCTGGCGCCAAGCGCCCGGCC502090.2168337138615515No Hit
TCGATGCCGACCGGCGATGCGGCGGCG468540.20234473559061394No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTTA468350.20226268176434034No Hit
TGCCGCCTGGAT441850.19081833231039563No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCC437120.18877562389842736No Hit
GCGGGGCGGACTGT425210.1836321445778054No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACG413630.17863117979755333No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT412070.17795747469762302No Hit
ATGCGTGCATTTATCAGA403880.17442052292298876No Hit
GCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT395780.1709224387502736No Hit
TCGGCCGAGGTGGGATCCCGAGGCCT386520.1669233943750461No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT375470.1621513165838729No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCCTC367480.1587007372579477No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTC364620.15746561124140873No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC363100.1568091806312202No Hit
CCGCCGAGGGCGCACC356410.1539200222219036No Hit
TCTGAGCGTCGCT355760.1536393117635993No Hit
TAACGATGCCGACCGGCGATGCGGCGGCGTT353710.15275399416433189No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCGC350690.15144977018882572No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC348380.15045216840623657No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG346810.1497741446838708No Hit
CGGCCGAGGTGGGATCCCGAGGCCTC341900.14765370106806444No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGG340550.14707068703927856No Hit
ACGATGCCGACCGGCGATGCGGCGGCG322760.1393878577266115No Hit
GTGCATTTATCAGATC322640.13933603425738608No Hit
TTGGGGGGGCCGGGCCACCCCTCCCACGGCGC320420.138377300076716No Hit
TCGCTTCTGGCGCCAAGCGCCCG309420.1336268153977201No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT306280.1322707679529885No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGC303390.13102268606914322No Hit
AAAAACCAACCCGG288190.12445837996725793No Hit
TCCGGCCGAGGTGGGATCCCGAGGCC287520.12416903226408271No Hit
CCCCGCGGGGGCGCGCCGGC286100.12355578787824871No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG282620.1220529072707118No Hit
TAACGATGCCGACCGGCGATGCGGCGGCG280660.12120645727336345No Hit
CCCCGCCCCCGG278630.12032977691896693No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCG277950.12003611059335628No Hit
TGCGGGGCGGACTGT273960.11831298024161138No Hit
CCCCCGCCCCTTGCCTCTCGGCG268900.11612775728927324No Hit
TACCCCCGCGGG265140.11450395525354373No Hit
ACGATGCCGACCGGCGATGCGGCGGCGTT259970.11227122745441565No Hit
CCGCCGAGGGCGCACCACCGGCCCGT256310.11069061164304063No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC253940.10966709812583877No Hit
CCGCCGAGGGCGCACCACCGGCCCGTC253790.10960231878930703No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC250900.10835423690546173No Hit
CCCGCGGGGGCGCGCCGGC247210.10676066522678036No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCG235300.1016171859061584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)