FastQCFastQC Report
Tue 11 Jul 2023
SRR8197275_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8197275_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45103959
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length12-37
%GC73

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC26943495.973641914670949No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG26799255.941662460273165No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC13541413.002266386416323No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG7673581.7013096344824188No Hit
CCGGCCGAGGTGGGATCCCGAGGCC5285321.1718084436889453No Hit
TCGCTTCTGGCGCCAAGCGCCCGG4810901.0666247723398294No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCC4212530.9339601430552914No Hit
CCCCCGCGGGGGCGCGCCGGC4064740.9011936180591154No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC3930830.8715044282476402No Hit
GGTGGGGGGGCCGGGCCACCCCTCCCACGGCG3803660.843309564022972No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCG3752740.8320200894116635No Hit
CGGCCGAGGTGGGATCCCGAGGCC3483730.7723778748557305No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCC3372700.7477614104784017No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG3342260.7410125572347208No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG3090510.6851970577571694No Hit
TACCCCCGCGGG2818190.624820983009496No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC2733810.6061130908708037No Hit
GCGCAGCGGAAGCGTGCTGGGC2703730.5994440532371005No Hit
GCCGGCCGAGGTGGGATCCCGAGGCC2642960.5859707348527875No Hit
CGCTTCTGGCGCCAAGCGCCCGG2384340.5286320874848258No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGC2275480.5044967338676412No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2137370.4738763619397579No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCC2090680.4635247207456889No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCC1973730.4375957330042802No Hit
TTGGGGGGGCCGGGCCACCCCTCCCACGGCG1921830.4260889825658098No Hit
GGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC1905940.4225660102253995No Hit
CGCTTCTGGCGCCAAGCGCCCGGC1880800.4169922201286144No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1870730.41475960014951235No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGG1785140.39578343887728346No Hit
CGCTTCTGGCGCCAAGCGCCCGGCC1731740.3839441233972388No Hit
TTTTGGTGACTCT1686150.3738363632336576No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1667910.36979237232811424No Hit
CGCTTCTGGCGCCAAGCGCCCGGCCG1590290.3525832399767834No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCC1573030.3487565248984019No Hit
TCGGCCGAGGTGGGATCCCGAGGCC1572870.34872105129396735No Hit
CCGGCCGAGGTGGGATCCCGAGGCCT1562480.3464174841059961No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGC1521920.33742492538182733No Hit
CCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1510980.3349994176786122No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1500990.33278453450172746No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC1499690.33249631146569636No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCCT1488680.33005528406054113No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC1372230.30423715133299056No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG1348010.2988673344617043No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT1339430.2969650624238994No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC1328800.2946082848292763No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCCG1310890.2906374582328793No Hit
ACCCCCGCGGGG1272840.2822013916782782No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGGCC1172060.2598574550850403No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCC1165600.2584252083059937No Hit
CCCCGCGGGGGCGCGCCGGC1142920.25339682487739046No Hit
TTGGGCGCGCGCCGCGGCTGGACGAGGCGCCG1095610.2429077234661374No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCG1037060.22992660134335435No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG1036890.22988891063864264No Hit
CCCGCGGGGGCGCGCCGGC994310.22044849765848717No Hit
CGGCCGAGGTGGGATCCCGAGGCCT953760.21145815603459553No Hit
GCCGGCCGAGGTGGGATCCCGAGGCCT952620.21120540660299908No Hit
AACGATGCCGACCGGCGATGCGGCGGCG915060.2028779779619789No Hit
CCCCCCGCGGGGGCGCGCCGGC902090.20000239890249988No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGG893270.19804691645804307No Hit
TCGCTTCTGGCGCCAAGCGCCCG893100.19800922575333135No Hit
GCGGGGCGGACTGT864580.19168605576286551No Hit
ATGCGTGCATTTATCAGA842310.18674857344562593No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG832930.18466893338564802No Hit
TCCGGCCGAGGTGGGATCCCGAGGCC782520.1734925308884748No Hit
TGCGGGGCGGACTGT758150.16808945751303117No Hit
GACCCCCGCGGG752500.16683679585643468No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCCG750880.16647762561153445No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGC738690.16377498037367408No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC718200.1592321419057693No Hit
CACCCCCGCGGG712560.15798169734944995No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCC682620.15134369911962717No Hit
CCGCCGAGGGCGCACC676640.15001787315388435No Hit
TCGCCGGCCGAGGTGGGATCCCGAGGCCT651510.14444630015737644No Hit
CCCCCGCGGGGGCGCGCCGG645050.14301405337832981No Hit
CCGGCCGAGGTGGGATCCCGAGGCCTC642120.14236444299712137No Hit
CCTCGCTTCTGGCGCCAAGCGCCCGGCC636460.14110956424024773No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT629910.13965736355870667No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCCT625070.1385842870245603No Hit
CCGGCCGAGGTGGGATCCCGAGGC619460.13734049376907248No Hit
CGGCCGAGGTGGGATCCCGAGGC605070.13415008647023646No Hit
CCGCGGGGGCGCGCCGGC584680.1296294190051033No Hit
CCCCCGCCCCTTGCCTCTCGGCG582520.12915052534523633No Hit
TTGGGGGGGCCGGGCCACCCCTCCCACGGCGC568750.12609757826358436No Hit
TGCCGGCCGAGGTGGGATCCCGAGGC551360.12224204088159976No Hit
TCACCCCCGCGG550320.12201146245277494No Hit
CCCCGCCCCCGG542590.12029764393852876No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC539970.11971676366591234No Hit
TGCCGGCCGAGGTGGGATCCCGAGGCCTC539460.1196036915517771No Hit
GTGTGGGGGGGCCGGGCCACCCCTCCCACGGCG532480.11805615555831807No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC521320.11558187164900535No Hit
TTTTGGTGACTCTAGAT516930.11460856462733127No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTT514320.114029901454992No Hit
ACGATGCCGACCGGCGATGCGGCGGCG506540.11230499743936004No Hit
TCGATGCCGACCGGCGATGCGGCGGCG499020.11063773803093428No Hit
TCTTTGGTGACTCT486600.10788409948669916No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT480000.10642081330377229No Hit
CCCCCGCCCCTTGCCTCTCGGC453340.1005100239648586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)