FastQCFastQC Report
Mon 10 Jul 2023
SRR8295893_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8295893_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2261902
Total Bases65 Mbp
Sequences flagged as poor quality0
Sequence length15-43
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAAATCACTTGCATACGACTTGGTCT642552.840750837127338No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCT398921.7636484692970782No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCC313581.3863553770234076No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTC251991.11406241296042No Hit
CTAAATCACTTGCATACGACTTGGTC224300.9916433161118386No Hit
TACCCCAACGCAAGGCGGGGTGCAATTATTAG183620.8117946754545511No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGT170050.7518009179884894No Hit
CTAAATCACTTGCATACGACTTGGTCC161150.7124535015221702No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCC113540.5019669287175129No Hit
ACCCCAACGCAAGGCGGGGTGCAATTATTAG84770.3747730891966142No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGCC78930.34895411030186096No Hit
TAAATCACTTGCATACGACTTGGTCT74450.32914777032780373No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCG52960.23413923326474798No Hit
CTAAATCACTTGCATACGACTTGGCC51700.2285687001470444No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGC48920.2162781588238571No Hit
CTTGGTCAAGGTGTTGTATTCAGT47160.20849709669119176No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGC43050.1903265481882062No Hit
CTAAATCACTTGCATACGACTTGGTCG42790.1891770731004261No Hit
TACTGCGATCTGTTGAGACTATCCTTTGATTG42140.18630338538097585No Hit
TTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCT42070.18599391131888118No Hit
GCTAAATCACTTGCATACGACTTGGTCT35990.1591138784969464No Hit
GACTATCCTTTGATTGAGTTTTTTGT33630.14868018154632695No Hit
TTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCC33550.14832649690393304No Hit
AGACTATCCTTTGATTGAGTTTTTTGT29590.13081910710543604No Hit
CAGCTTAATTTTTGCGTATCGGG28350.1253369951483309No Hit
TAAATCACTTGCATACGACTTGGTC26360.11653908966878317No Hit
TTGGTCAAGGTGTTGTATTCAGTAGAGCAGTC25670.11348855962813598No Hit
CTTGGTCAAGGTGTTGTATTCAGTAGAGCAGTCCTT24580.10866960637551937No Hit
CAGCTTAATTTTTGCGTATCGGGG23350.10323170499871347No Hit
CGAGTACAGACCGCGAAAGCGTGGCCTATCG23060.10194959817003567No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)