FastQCFastQC Report
Thu 13 Jul 2023
SRR8353547_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8353547_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133223562
Total Bases6.7 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA87037106.533161153580326No Hit
CTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA37109242.7854862490465466No Hit
TCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT17156961.2878322529763917No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATC13816011.0370545414481562No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGA11233240.8431871833602528No Hit
GTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA9929130.7452983429462725No Hit
ACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGATCGGAAGA7150790.5367511491698442No Hit
TGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATAG6415640.48156946892022No Hit
ACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATAGATCGGAAGAGC6231650.4677588488438704No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGAT5356070.4020362404061828No Hit
TGGTCGGCTTGTCCCTTCGGTCGGCCTGTAGGCACCATCAATAGATCGGA5324050.3996327616581818No Hit
ACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATCGGAAGAGC4391310.3296196208895841No Hit
CCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT4086540.3067430369411681No Hit
TTTGGTCGGCTTGTCCCTTCGGTCGGCCTGTAGGCACCATCAATAGATCG3993620.29976829474053546No Hit
ACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGATCGGAAGAG3678980.2761508508532447No Hit
ATGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA3626200.27218908919429735No Hit
TTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTGTAGGCACCATCAATA3522990.26444196109994417No Hit
TCGGCGTGCCTCGGCATCAGCGTGCTCCTGTAGGCACCATCAATAGATCG3359410.2521633523055028No Hit
GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGCTGTAGGCACCATCAAT3355930.25190213725106675No Hit
GAAGGTCACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATCG3345550.25112299579559355No Hit
ACGATGGATACTAGGCGCTGTGCGTCTGTAGGCACCATCAATAGATCGGA3053870.229228970773203No Hit
ACGGCGTGCCTCGGCATCAGCGTGCTCCTGTAGGCACCATCAATAGATCG2600000.19516067285455108No Hit
TGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTGTAGGCACCATCAAT2086210.15659467204457422No Hit
GAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGAT1982850.14883628468063329No Hit
TACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCACTGTAGGCAC1777150.13339607298594824No Hit
GTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTGTAGGCACCATCAATA1764240.13242702518342814No Hit
GAAGGTCACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGATC1629170.12228842822863421No Hit
TCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCTGTAGGCAC1606220.12056575998170653No Hit
TCGATCCTATTGTGTTGGCCTTCGGGATCGGCTGTAGGCACCATCAATAG1550960.1164178450655748No Hit
TTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCCTGTAGGCACCATCAA1503600.11286291834773192No Hit
TGGTCGGCTTGTCCCTTCGGTCGGCGCTGTAGGCACCATCAATAGATCGG1497680.11241855250800155No Hit
GCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT1482080.11124758847087424No Hit
ACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCCTGTAGGCACCATC1432140.10749900231612182No Hit
TTTGGTCGGCTTGTCCCTTCGGTCGGCGCTGTAGGCACCATCAATAGATC1374280.10315592672713554No Hit
TCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCCTGTAGGCACC1363740.1023647753841021No Hit
TGGAACCCTGAACAGACTGCCGGTCTGTAGGCACCATCAATAGATCGGAA1361750.10221540240757113No Hit
TACCTGGTTGATCCTGCCAGTAGTCCTGTAGGCACCATCAATAGATCGGA1348200.1011983150548099No Hit
TCCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAA1341270.10067813679985527No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)