FastQCFastQC Report
Mon 17 Jul 2023
SRR8353557_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8353557_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164212825
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGATCGGAAGA42488462.5874020497485506No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGA31532401.9202154277535874No Hit
ACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGATCGGAAGAG17709831.0784681403538365No Hit
TTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA16131350.9823441013209535No Hit
ACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATAGATCGGAAGAGC8610230.5243335896572024No Hit
CTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA8419350.5127096498096297No Hit
ACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATCGGAAGAGC6988830.42559586926295184No Hit
TAGGCGGGATTACCCGCTGAGCTGTAGGCACCATCAATAGATCGGAAGAG5537800.3372330997898611No Hit
GAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGAT5182180.3155770567859118No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGAT4812650.2930739423062724No Hit
GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGCTGTAGGCACCATCAAT4209340.2563344245493615No Hit
TACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGATCGGAAG3959040.24109200971361402No Hit
TCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT3908170.23799420051387582No Hit
TCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTGTAGGCACCATCAATAG3830770.2332808049553986No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATC3729230.22709736587261076No Hit
ACGATGGATACTAGGCGCTGTGCGTCTGTAGGCACCATCAATAGATCGGA3309050.2015098394415905No Hit
AGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCTGTAGGCACCA2902900.17677669207627358No Hit
TGTGGTGTCCGGTGCGCCCCCGGCGGCCCTGTAGGCACCATCAATAGATC2839460.17291341282265865No Hit
AAGATGAGTGCTCTCCTCTGTAGGCACCATCAATAGATCGGAAGAGCACA2761410.16816043448494356No Hit
GTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA2460580.14984091528782847No Hit
ATGCCTGTCGGGACCCGACTGTAGGCACCATCAATAGATCGGAAGAGCAC2268910.1381688671393358No Hit
GCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTGTAGGCACCATCAATAGAT2244040.1366543691091119No Hit
TGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATAG2192170.13349566332593085No Hit
TCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCCTGTAGGCA1778810.1083234515939909No Hit
TAGCCTGCTAACTAGCTACGTGGAGGCCTGTAGGCACCATCAATAGATCG1746870.10637841471882602No Hit
ACGCTTGTGGAGACGTCGCTGCCGTGATCGCTGTAGGCACCATCAATAGA1746180.10633639607625044No Hit
TATTCTGGTGTCCTAGGCGTAGAGGCTGTAGGCACCATCAATAGATCGGA1697690.10338352074510623No Hit
TCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGCTCTCTGTAGGCAC1659760.10107371333511862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)