FastQCFastQC Report
Fri 14 Jul 2023
SRR8353558_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8353558_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141774500
Total Bases7.2 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA35168412.4805878349068418No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGA32318882.2795975298801974No Hit
CTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA17122741.207744693157091No Hit
ACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGATCGGAAGA11577580.8166193497420199No Hit
TCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT8115160.5723991267823197No Hit
GTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA4878990.34413734486808273No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGAT4815690.339672508102656No Hit
TGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATAG4613130.32538503045329026No Hit
GAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGAT4515060.3184677075214513No Hit
GCGACCCCAGGTCAGGCGGGATTACCCGCTGAGCTGTAGGCACCATCAAT3826900.269928654306663No Hit
TGAAGGTCACGGCGAGACGAGCCGTTTACTGTAGGCACCATCAATAGATC3678000.2594260603987318No Hit
ACGAGACCTCAGCCTGCTAACTAGCTACGTGGAGGCCTGTAGGCACCATC2894760.2041805825448159No Hit
CCTGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAAT2202910.1553812568550762No Hit
ACGATGGATACTAGGCGCTGTGCGTCTGTAGGCACCATCAATAGATCGGA2096190.14785381009984166No Hit
TCAGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCTGTAGGCAC2084960.1470617071476182No Hit
TCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTGTAGGCACCATCAATAG2051650.14471220141844973No Hit
TACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGATCGGAAG1909630.13469488518739267No Hit
AGCGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCTGTAGGCACCA1777350.12536457543493365No Hit
ATGGCCGAGGGCACGTCTGCCTGGGTGTCACACTGTAGGCACCATCAATA1647850.11623035172051391No Hit
ACGGCGTGCCTCGGCATCAGCGTGCTCCTGTAGGCACCATCAATAGATCG1602320.11301891383852526No Hit
ACGGCGAGACGAGCCGTTTATCTGTAGGCACCATCAATAGATCGGAAGAG1558790.10994854504865122No Hit
ACCTGCGGAAGGATCATTGCTGTAGGCACCATCAATAGATCGGAAGAGCA1542150.10877485020225781No Hit
TATTCTGGTGTCCTAGGCGTAGAGGAACAACACCAATCTGTAGGCACCAT1530770.1079721670681258No Hit
CGAAGGTCACGGCGAGACGAGCCGTTTATCCTGTAGGCACCATCAATAGA1492540.1052756313723554No Hit
ATGTACACGGAGTCGACCCAACGCGACTGTAGGCACCATCAATAGATCGG1424970.10050961209526396No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)