FastQCFastQC Report
Wed 23 Aug 2023
SRR8392705_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8392705_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91019238
Total Bases6.6 Gbp
Sequences flagged as poor quality0
Sequence length35-81
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA13628681.4973405951827459No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA13607691.4950344893021408No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAA10814481.1881532121813632No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA8897100.9774966474669893No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA8872790.9748257835338064No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAA8837890.9709914293064066No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA8108970.890907260726573No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAAA7739840.8503520980916144No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA7373160.8100661093207571No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA6817350.7490009969101258No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA6327560.695189296135395No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAAA6300640.6922316796367819No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA6241060.6856858107293756No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA5948810.6535772140830272No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA5755560.6323454388840302No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA5657680.621591668345982No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAA5644500.6201436228240013No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAA5513080.6057049170198502No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA4555310.5004777121953053No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA4050300.44499383745664844No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAA3880870.4263790914180143No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA3655970.401670029362364No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA3599260.3954394784100478No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAA3541290.3890704951847652No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA3178150.3491734351808131No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAA3138870.34485786400453056No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA2911170.3198411746756219No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAA2814180.3091851856637165No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAAA2711020.2978513179818095No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAAA2620990.2879600024777179No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAA2602910.28597360922753495No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAA2597980.2854319654928335No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAAA2546130.27973536759338724No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGTAAAAAAAAAAAAAAAA2514210.27622841667824116No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGTAAAAAAAAAAAAAAAAA2345870.2577334255424112No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA2331650.2561711184617915No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA2128280.23382749040373202No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAA2119700.23288483254496153No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCTAAAAAAAAAAAAAAA2103470.23110169302889574No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGTAAAAAAAAAAAAAAAAAA2069860.2274090670809615No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAAT2036540.2237483025291862No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA2026430.22263754833895666No Hit
ACCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA2005720.22036220518567734No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA2002360.21999305245776724No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTAAAAAAAAAAAAAAAAA1977040.21721122297244455No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCTAAAAAAAAAAAAAAAA1916880.2106016312727206No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTAAAAAAAAAAAAAAAAAA1904690.20926235396521337No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAAA1895740.20827904535961947No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA1861910.2045622486973578No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA1764260.1938337475424701No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCACAAAAAAAAAAAAAAAA1761970.193582152379698No Hit
AGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA1758410.19319102627512658No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAA1740240.19119474500544598No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCGCAAAAAAAAAAAAAA1737490.1908926110763529No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCACAAAAAAAAAAAAAAAAA1714190.18833271269530955No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCAAAAAAAAAAAAAAAAAAAA1702840.18708572356977984No Hit
GCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAAA1702350.1870318887969596No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAA1699920.1867649122705246No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAA1671090.18359745002479586No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAAA1650010.18128145612469312No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAT1647340.18098811154626454No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAA1638550.18002238164199968No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAA1620520.17804148173598203No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCATAAAAAAAAAAAAAA1609510.17683184735077653No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCCAAAAAAAAAAAAAAA1535990.16875443409007665No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGCAAAAAAAAAAAAAAAAAA1527060.16777332282214888No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAAA1501160.1649277705445084No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA1463110.16074733563469298No Hit
TTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAA1441630.15838739498126758No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTAAAAAAAAAAAAAAAAAAA1423200.15636254832192728No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAAAAA1409760.1548859374102868No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAA1408350.15473102510482453No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAAAAAA1401420.15396964760350992No Hit
TTGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAA1385240.15219200143160944No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGTAAAAAAAAAAAAAAAAAA1348130.14811484139210218No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAACAAAAAAAAAAAAAAAAAAAA1344130.14767537385887586No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAAA1341830.1474226800272707No Hit
TTGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAA1336540.1468414842145789No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAAA1335810.1467612813897651No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAAA1301950.14304118872100424No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA1299350.14275553482440712No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAAA1272350.1397891289751294No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA1256180.13801258147206197No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCGAAAAAAAAAAAAAAA1232260.13538456562336854No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACTAAAAAAAAAAAAA1192100.1309723115897762No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAA1190280.13077235386215824No Hit
TGCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAAAAAAAAAAAA1183440.13002086438034122No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGAAAAAAAAAAAAAAAAAAA1174460.12903425976824812No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGTAAAAAAAAAAAAAAAAA1138980.12513618274853058No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCGAAAAAAAAAAAAAAAA1119920.12304211995270715No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAAAA1119160.12295862112139415No Hit
ATTATACCCACACCCACCCAAGAACAGGGTTTAAAAAAAAAAAAAAAAAA1105410.12144795147592866No Hit
ATTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAAA1100860.1209480571568837No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGAAAAAAAAAAAAAAAAA1077860.11842111884083231No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAA1075280.11813766228190133No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAAAAA1062830.11676981958473438No Hit
AGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA1055000.11590956188844384No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCATAAAAAAAAAAAAAAA1041010.11437252419098476No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAAA1037810.1140209501644037No Hit
AGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA1029770.1131376204226188No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAA1025040.11261795006457864No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGCAAAAAAAAAAAAAAAAAA1000250.1098943500274085No Hit
GCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAAA997590.10960210411781299No Hit
ACCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAA978540.1075091399908226No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATAAAAAAAAAAAAAAAAAAAA975490.10717404599673752No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGAAAAAAAAAAAAAAAAAA972620.10685872804164763No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAAAAA970810.10665986898286271No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAA970130.10658515950221426No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCCAAAAAAAAAAAAAAAA955130.10493715625261552No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAT916140.10065344647249189No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCAAAAAAAAAAA911850.10018211754310666No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)