FastQCFastQC Report
Mon 17 Jul 2023
SRR8392706_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8392706_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107467947
Total Bases7.9 Gbp
Sequences flagged as poor quality0
Sequence length35-81
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA17874201.6632121947951606No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA17629391.6404323793400466No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA12190871.1343726515962942No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA12011541.117685815659994No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA11922171.1093698477370189No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAA11044911.0277399269570116No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA10536000.9803853422453487No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA9198620.8559407950725996No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA8587790.7991024523805225No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAAA8567340.7971995594184003No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA7398450.6884331753355258No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAA7246140.6742605774352421No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA7108100.6614158173134173No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA6361980.591988604751145No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAA6309470.587102496710019No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA6161820.5733635164724976No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA5965290.5550762033260019No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA5913790.5502840767954746No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA5879560.5470989410451844No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA5818000.5413707214486939No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAA5778290.5376756662151553No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA5777250.5375788931745389No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAA5587020.5198778013317776No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAA5028200.46787904118052986No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAAA4714520.43869080331459204No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAA4638730.43163846797966654No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA4298040.3999369225877182No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAA3956310.36813860415515337No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA3902170.3631008229830612No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAAA3815950.35507796571195316No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAA3468990.3227929905462882No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAA3420340.3182660593674503No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTAAAAAAAAAAAAAAAAA3367980.31339390897641317No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAAA3111220.28950213406421543No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGTAAAAAAAAAAAAAAAA3103260.28876144809949705No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGTAAAAAAAAAAAAAAAAA3059220.28466348203339176No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAAA3021020.2811089338107482No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGTAAAAAAAAAAAAAAAAAA2944080.27394958982514106No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAA2759080.25673515471548No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCTAAAAAAAAAAAAAAAA2623280.24409882883498277No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAAA2597170.24166926720950574No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAA2577610.2398491896379113No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAA2573240.23944255676532092No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAA2546770.2369794967796305No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTAAAAAAAAAAAAAAAAAAA2488940.231598357415351No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCTAAAAAAAAAAAAAAA2459540.2288626579979238No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAAA2348070.21849026296184854No Hit
TTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAA2315120.21542423249231699No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCACAAAAAAAAAAAAAAAAA2314510.21536747138195542No Hit
GCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAAA2308230.21478311109823287No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGCAAAAAAAAAAAAAAAAAA2264220.21068793656214535No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCACAAAAAAAAAAAAAAAA2244850.20888553868066354No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA2107690.1961226634393602No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA2085260.19403552949606453No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGTAAAAAAAAAAAAAAAAAA2011310.18715440800222974No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAAA2004480.18651886966818115No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAA2000780.18617458096598793No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAAT2000490.18614759617581603No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA2000180.18611875036563227No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCAAAAAAAAAAAAAAAAAAAA1887480.1756319025988279No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAT1830610.17034009219511748No Hit
TTGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAA1828980.17018841906415128No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAA1797030.1672154395952125No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAACAAAAAAAAAAAAAAAAAAAA1784130.16601508168756587No Hit
TTGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAA1766660.1643894807072103No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGTAAAAAAAAAAAAAAAAA1757670.16355295221188137No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTAAAAAAAAAAAAAAAAAA1712030.1593061045448277No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCCAAAAAAAAAAAAAAA1709820.15910046183351767No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAA1642230.15281114470345283No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCATAAAAAAAAAAAAAA1583140.14731276107842647No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGCAAAAAAAAAAAAAAAAAA1560280.14518561520487594No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAAA1547240.1439722301571463No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA1546140.14386987405649426No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCATAAAAAAAAAAAAAAAA1489330.13858364671281942No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCATAAAAAAAAAAAAAAA1488450.1385017618322978No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA1452800.13518449366116578No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAAAA1443040.13427631589538042No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA1442510.13422699886506625No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCGCAAAAAAAAAAAAAA1442030.13418233438478172No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCGAAAAAAAAAAAAAAAA1435150.1335421435007035No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAAAAA1397910.13007692423862904No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAA1375920.12803073273559418No Hit
ACGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAA1373440.12779996625412413No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCGAAAAAAAAAAAAAAA1366140.12712069394979697No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCCAAAAAAAAAAAAAAAA1345530.12520291282758012No Hit
AGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA1334650.12419051794113084No Hit
ACCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA1330500.1238043562886709No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGAAAAAAAAAAAAAAAAAAAA1313580.12222993335864135No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAAAAAA1309310.12183260558611024No Hit
TTCGCTGCGATCTATTGAAAGTCAGCCCTCGACGCAAAAAAAAAAAAAAA1308050.12171536132536337No Hit
CCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAAAA1290480.12008045524494852No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATAAAAAAAAAAAAAAAAAAAA1287370.11979106663310504No Hit
GCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAAA1285030.11957332729171796No Hit
ATTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAAA1275670.11870236992616971No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGAAAAAAAAAAAAAAAAA1261640.11739686438785324No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCAAAAAAAAAAA1233960.11482121269144557No Hit
ACGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAA1212570.11283085178876637No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAACAAAAAAAAAAAAAAAAAAAA1208150.11241956636614636No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGTAAAAAAAAAAAAAAAAA1198420.1115141801303788No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAT1197130.11139414433961412No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGAAAAAAAAAAAAAAAAAA1185690.11032964089283291No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATAGAAAAAAAAAAAAAAAAAA1182030.1099890742306634No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAAAAA1179840.10978529253936524No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAAA1178600.10966990929863023No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAA1174820.10931817651638957No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAAAAAA1141710.1062372578867632No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGGAAAAAAAAAAA1140670.10614048484614673No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTAAAAAAAAAAAAAAAA1115150.10376582331101943No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAAA1113820.10364206548023105No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCCAAAAAAAAAAAAAAAAAA1100210.10237564136216354No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAA1099840.10234121249194422No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)