FastQCFastQC Report
Tue 11 Jul 2023
SRR8392710_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8392710_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38962857
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length51-81
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA5553011.4252060622761826No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA4230111.0856775723607743No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAA4174981.071528199279637No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA4027581.0336972979163206No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAA3599900.9239312199308177No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA3359140.8621390366727985No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA2721280.6984292758613672No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA2631810.6754663807122768No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAA2618640.6720862384398557No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA2434520.6248309768454607No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAA2353970.604157441534639No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA2296330.5893638651806257No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAA2207960.5666832901909631No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAA2160740.5545640557108017No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAAA2058240.5282569499459446No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAA2050770.5263397394087399No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAA2023420.519320233626605No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA1851950.47531165386562896No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTAAAAAAAAAAAAAAAAA1697190.4355917739810507No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAA1651780.4239370844904931No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAA1498210.3845226236874775No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAA1481940.38034685187485096No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCACAAAAAAAAAAAAAAA1481230.3801646270446749No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAA1449770.37209027048504173No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA1401620.3597323471428186No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAAA1329430.34120444504364755No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAAAAAAAAAAAAAAAAAAA1299100.3334201082841538No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA1238670.3179104653439557No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA1218010.31260797944052204No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAA1215300.3119124452295683No Hit
TTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAAA1201420.308350078126971No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA1193940.30643030104286245No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAAA1077970.2766660565984676No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAA929130.23846557248099134No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAAA852490.21879555700958994No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAA843740.21654982846868748No Hit
TTCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAA819020.21020532452227514No Hit
ACGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAA807320.2072024646447256No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAA805530.20674305274892957No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACGAAAAAAAAAAAAA801890.20580882967591416No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCAAAAAAAAAAA792450.20338600939864343No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAA781980.20069883479027217No Hit
ACCGCCGAGGGCGCACCACCGGCCCGTCTCGCAAAAAAAAAAAAAAAAAA780800.20039598225561334No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAATAAAAAAAAAAAAAAAA769850.19758561339585545No Hit
AGCCGCCTGGATACCGCAGCTAGGAATAACGAAAAAAAAAAAAAAAAAAA767520.1969876079672494No Hit
TCGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAA703060.1804436466247842No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAGTAAAAAAAAAAAAAAAA701910.18014849373083702No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGAAAAAAAAAAAA687220.17637823632902486No Hit
TCGCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAAAAAAAAAAA654910.16808572328256113No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCAAAAAAAAAAAAA646240.1658605271168898No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCGCAAAAAAAAAAAAAA645420.16565007027077094No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGGAACAAAAAAAAAAAAAAAA639620.16416147306651563No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTAAAAAAAAAAAAAAAA630680.16186698013443934No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA621390.15948265806072692No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCACTAAAAAAAAAAAAA617600.15850993678415318No Hit
CGCTGCGATCTATTGAAAGTCAGCCCTCGACACAAAAAAAAAAAAAAAAA579330.1486877617829719No Hit
ACGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAA577460.14820781751194478No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCTAAAAAAAAAAAAAAAAAA564250.14481740905190807No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGCAAAAAAAAAAA563800.1447019144412331No Hit
ACGTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAA563030.14450429032963366No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGTAAAAAAAAAAAAAAAAAAA561400.14408594318429985No Hit
GCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAAAT556630.14286170031114503No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGAAAAAAAAAAAA541910.1390837432686212No Hit
CTTTGGTGACTCTAGATAACCTCGGGCCGATCGCAAAAAAAAAAAAAAAA541630.1390118799553123No Hit
AGTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCAAAAAAAAAAAAA537270.13789286550521693No Hit
AGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCAAAAAAAAAAAAAAAAAA536620.13772603995646418No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCAAAAAAAAAAAAAAAAAAAA532010.13654286183377157No Hit
TCGTGGGGGGCCCAAGTCCTTCTGATCGAGGACAAAAAAAAAAAAAAAAA529130.1358036963254517No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAA529100.13579599668474002No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAA527060.13527242111634677No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTTAAAAAAAAAAAAAAAAAA516090.1324569191627811No Hit
TCTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA505900.12984160786771873No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCGAAAAAAAAAAAAAAAAAA484360.12431326583674293No Hit
ACTCCCGGGGCTACGCCTGTCTGAGCGTCGCAAAAAAAAAAAAAAAAAAA474660.12182371533997109No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCTAAAAAAAAAAAAAAAAAAA466250.11966524939380087No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGTAAAAAAAAAAAAAAAAAAA462100.11860013242868715No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCACAAAAAAAAAAAAAAAAAAA451950.11599508732124034No Hit
TGTGGGGGGCCCAAGTCCTTCTGATCGAGGTCAAAAAAAAAAAAAAAAAA440790.11313082097650078No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCAAAAAAAAAAAAAAAAAAAA424060.10883698800629533No Hit
TGCCGCCTGGATACCGCAGCTAGGAATAATGTAAAAAAAAAAAAAAAAAA424040.10883185491248756No Hit
ACGCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAAAAAAAAAAA418880.10750751671008109No Hit
TTTTGGTGACTCTAGATAACCTCGGGCCGATCGCATAAAAAAAAAAAAAA406370.10429676653331658No Hit
CGCTGAGAAGACGGTCGAACTTGACTATCTAAAAAAAAAAAAAAAAAAAA403280.10350370354001504No Hit
TTGCCGCCTGGATACCGCAGCTAGGAATAATGAAAAAAAAAAAAAAAAAA397110.10192014410031584No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTAAAAAAAAAAAAAAAAAAA396710.10181748222416032No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)