FastQCFastQC Report
Tue 11 Jul 2023
SRR8397279_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8397279_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22677116
Total Bases1.7 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATATATACAACAACAACAACAAGGGAAATGGGGCGGAGTCCAGCCTAGT518970.22885185223729507No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT408180.17999643340890437No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT381480.16822244945080317No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT324860.14325454788871742No Hit
GTGTGGACTGACCCTCGCTCTATCTCTGCTCGTGTGTTTGGGCATTCTGG302710.1334869919084949No Hit
GCCTTACACAGCGACGCGGAGAACGAGACTCGCGGTTCTGTGGATCTAGC236590.10432984511787124No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)