FastQCFastQC Report
Tue 11 Jul 2023
SRR8494672_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8494672_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35306820
Total Bases626.8 Mbp
Sequences flagged as poor quality0
Sequence length8-42
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGAGAGATCC3331110.943474943367882No Hit
TCGTCGGGTCCCGGGG2992620.8476039473393525No Hit
GGGGAGAGATCC2889410.8183716347153326No Hit
TTGGGGGTGGGGGCC2824980.8001230357194445No Hit
GGGAGAGATCC2317920.6565077228705388No Hit
TGCCGTCGGGTCCCGGGG2034420.5762116214374446No Hit
GGGGTCCCGGGG1973840.5590534633252159No Hit
ACCGGGTCAGTGAAAAAAC1720610.487330776320269No Hit
TGGACCCCGTCCCGGCCC1637590.46381690562899747No Hit
GGCGGGAGAGGC1600230.4532353805865269No Hit
TCGGGAGGGAGGAAGAC1495790.42365469334253264No Hit
TGGCGGGAGAGGC1488430.4215701102506541No Hit
TGGGGGTGGGGGCC1238690.3508359008259594No Hit
TAAGCTTGGGCTGC1183840.33530065862629377No Hit
GGGTCCCGGGG1122950.3180546987805755No Hit
TGGACCCGTCCCCCCGAC1084550.3071786130838178No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1077870.3052866273428193No Hit
GGGAGAAAGCCC1057220.2994378989668285No Hit
AACCCCCGGGACGGGGAC1038130.29403101157226846No Hit
ACGCTCCCCGGACCCCGTCCCGGCCC979380.2773911669190258No Hit
TAACCCCCGGGACGGGGAC889410.2519088380092005No Hit
TGAAAGGTCCCCGGTTC868590.24601196029548966No Hit
TGAACGGGGAGGAGGCGGGAAC864550.24486770544614325No Hit
TGGTCGGGGGACGGTC861580.24402650819303467No Hit
TAAGGGCCAGCGAGAGCTC844560.23920590979306547No Hit
TCGGCGGGGTC840120.23794836238437786No Hit
TGCCCCGGGCGTCGTCGC838090.23737340264572115No Hit
AAGACGGGTCGGGTGG821250.2326037858974555No Hit
ACCGGGGCCCGCGCGGCC805520.22814855600136177No Hit
TCGGCGGGAGAGGC793430.22472428839527323No Hit
TGAGCGGCGCCGGGGAGCGG734410.20800797126447526No Hit
GGACCCGTCCCCCCGAC733830.20784369705343048No Hit
AACGCTTGGTGAATTCTGCTTC731750.20725457574485606No Hit
CGGGAGGGAGGAAGAC703840.19934958741682202No Hit
GGGGGGTGGGGGCC677980.19202522345541173No Hit
GGGGAGGGCGGCGC674490.19103674587515954No Hit
TGGCGGGAGAGGCCGGGAGG672230.19039664291488162No Hit
TGGGAGAAAGC650620.18427601239647184No Hit
TGGGTCCCGGGG640080.18129075345783052No Hit
TCGGCGGGAGAGGCCGGGAGG639340.18108116222304926No Hit
TATCCTGAGGGAAACTTC637750.18063082429966787No Hit
TGAGCCGCCCCGGCGGTGAACGG634290.17965084366136627No Hit
GGGGAGAAAGCCC620790.1758272197835999No Hit
AGGTCGACCCGTGCGGAGGAGC602020.1705109664365128No Hit
TACTCGGGGGGGGT579320.16408161369389823No Hit
AGGGAGAGATCC570300.1615268664807536No Hit
TGGGAGGGAGGAAGAC567730.16079896178698622No Hit
TGGGCGTGGGGGTGGGGGCC564430.15986429817242107No Hit
GGGGGGTGGGGGC546440.15476896531604942No Hit
TGGCGGGGTC532760.15089435978657947No Hit
TGATGCCGACTGGC532400.1507923964831724No Hit
GCCCCGGGCGTCGTCGC520570.1474417690406556No Hit
AGAAGGATCGTGAGGCC517410.1465467578218599No Hit
TGTGGGGGTGGGGGCC512110.14504563141058865No Hit
ACGCTCCCCGGACCCCGTCCCGGC509730.14437154068250838No Hit
GGGGAGAAAGC505810.14326127360096433No Hit
GGCGGGAGAGGCCGGGAGG505250.14310266401788663No Hit
CGTCGGGTCCCGGGG502530.1423322746143663No Hit
TCGGCGTAGGGTAGGC497040.14077733423740796No Hit
TGGGAGAAAGCCC485670.13755699323813358No Hit
TGAAGGGGGGACGGAGAAGGC481290.13631643971334717No Hit
TGGGGAGGGCGGCGC458500.1298615961448808No Hit
TGGGGGTGGGGGC449380.12727852579190083No Hit
AAAAAAAAAAAAAAAAAAAAA448780.12710858695288899No Hit
AAAAAAAAAAAAAAAAAAAAAAA445910.1262957128396157No Hit
AAAAAAAAAAAAAAAAA441000.12490504667370213No Hit
AAAAAAAAAAAAAAAAAAA429790.12173002269816426No Hit
AAAAAAAAAAAAAAAAAAAA425640.12055461239499903No Hit
AAAAAAAAAAAAAAA424240.12015808843730474No Hit
AAAAAAAAAAAAAAAAAAAAAA423720.12001080811016115No Hit
AAAAAAAAAAAAAAAA419670.11886372094683123No Hit
GATGCGGCGGCGTT417190.11816130707891564No Hit
TGGGAGAAAGCCCC413990.11725496660418581No Hit
AAAAAAAAAAAAAAAAAA413490.11711335090500928No Hit
TGAACGGGGAGGAGGC410770.11634296150148894No Hit
TGGGAGAAAGCC399480.11314527901408282No Hit
TGTCCCCGCTCGGCGGGGTC396250.11223044159740243No Hit
AAAAAAAAAAAAAA393270.1113864120303103No Hit
GCGGGGGAGACGGGTCGGGGC391820.11097572650269835No Hit
AAAAAAAAAAAAAAAAAAAAAAAA389350.11027614494876627No Hit
TTGGGGGTGGGGGC388600.11006372140000148No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA387180.10966153281434012No Hit
AAAAAAAAAAAAA385150.10908657307568338No Hit
GGGAGAGCGACGCTCAGAC378200.10711811485712959No Hit
AAACGCTTGGTGAATTCTGCTTC375770.10642986255913163No Hit
AGGAGATCCTGGGTTCG372940.10562831770179246No Hit
GGGAGAAAGCCCC370420.10491457457794273No Hit
GGGGGGGTGGGGGCC363490.102951780987356No Hit
GGGGAGGGAGGAAGAC357150.10115609392179754No Hit
ACTCGGGGGGGGT356560.10098898739676924No Hit
AAAAAAAAAAAA356260.10090401797726331No Hit
CGGGAGAGATCC354910.10052165558948668No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)