FastQCFastQC Report
Fri 14 Jul 2023
SRR8495833_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR8495833_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152871687
Total Bases4.4 Gbp
Sequences flagged as poor quality0
Sequence length20-290
%GC69

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC116015467.589074358811779No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG103088806.7434854696147895No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT71710894.690920301023433No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC66197784.330283867410975No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCC63798924.173364031758216No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCC28745621.8803756643308318No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT25512381.6688754144513367No Hit
CGACTGCATAATTTGTGGTAGTGGGG17676371.1562880181992106No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCT17650281.1545813581556146No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC17139521.1211703315604804No Hit
CGACTGCATAATTTGTGGTAGTGGGGG15944251.0429825373746284No Hit
CAATTTTTGACAGTCTCTACGGAGACTG15132990.9899145026115922No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC14692870.9611243447584902No Hit
ACTGCATAATTTGTGGTAGTGGGG14610110.9557106542560756No Hit
ACTGCATAATTTGTGGTAGTGGGGG14369000.9399386035427214No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG12336180.8069630316829042No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC12265790.8023585165250384No Hit
GCAATTTTTGACAGTCTCTACGGAGACTG9686570.6336405511113382No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC9057900.5925165200800067No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC8656900.5662853710772486No Hit
TGGCAATTTTTGACAGTCTCTACGGAGACTG8561250.5600284897752191No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCGC8264920.5406442593912109No Hit
CCCGGGGCTACGCCTGTCTGAGCGTCGCT7396640.4838462991515231No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG5927380.387735630862764No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGC5572800.364541015368006No Hit
CTGGCAATTTTTGACAGTCTCTACGGAGACTG5491100.3591966640624565No Hit
CGCTTCTGGCGCCAAGCGCCCGGCC5480580.3585085052407383No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG5151480.3369806470442104No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG4689850.3067834268094392No Hit
TCGGTTGGCCTCGGATAGCCGGTCCCC4236610.27713503285928937No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG4113520.26908318215916593No Hit
AATTTTTGACAGTCTCTACGGAGACTG4085440.2672463475856062No Hit
TTGGCAATTTTTGACAGTCTCTACGGAGACTG3934260.2573570081685564No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT3765060.24628890240479911No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCG3574570.23382812541343903No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG3399630.22238454135722333No Hit
CGTGGGGGGGCCGGGCCACCCCTCCCACGGCG3296180.21561742822920507No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3082430.20163511376701165No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA2778060.18172495211621495No Hit
ACTGCATAATTTGTGGTAGTGGGGGA2712600.17744292963810887No Hit
GACCTGGTATTGCAGTACCTCCAGG2615200.17107157324691524No Hit
GCATAATTTGTGGTAGTGGGGG2603220.17028790949366576No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGA2417130.1581149555836327No Hit
GCATAATTTGTGGTAGTGGGG2415250.15799197663070205No Hit
CGTTTTTTCACTGACCCGGTGAGGCGGGG2401740.15710822894235477No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG2251890.14730589059306973No Hit
CGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGGG2191420.14335028565492314No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC2133590.13956737456557275No Hit
TGGGCGCGCGCCGCGGCTGGACGAGGCGCCGCC2099050.13730796337715565No Hit
CTCGGTTGGCCTCGGATAGCCGGTCCCC2025560.13250066377562775No Hit
CGCTTCTGGCGCCAAGCGCCCGGC1928180.12613061567116743No Hit
CGACCTGGTATTGCAGTACCTCCAGG1886540.12340676269242716No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC1864030.12193428597409278No Hit
TCGGTTGGCCTCGGATAGCCGGTCCC1836050.12010399283419958No Hit
TCACTGACCCGGTGAGGCGGGG1817570.11889513589262608No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC1806610.11817819476277515No Hit
CCCTGGTGGTCTAGTGGTTAGGATTC1775480.11614184646238646No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGC1748190.11435668921479228No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGT1744450.1141120395956643No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT1690810.11060321457694125No Hit
TCGACTGCATAATTTGTGGTAGTGGGG1591470.10410495437261709No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)